FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003667576

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003667576
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length146
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTCTGCACCAAGGGTTCTTCCTCTGTAGAACAGGAGGACCAGGTTGGGA313.043478260869565No Hit
GCCAAGCGGCAAAGTATCACCAACCCCGAGAACACGATCTATGCCATCAA28.695652173913043No Hit
GACCATCACCAGGGCCATCTGTAGTGAGCGATCCTGGGCTATGAATGCAT14.3478260869565215No Hit
ATACCTTCTTGTGTGATCTTGAACAACTGACACAACCTCACATGATTTAG14.3478260869565215No Hit
ATCCAAGATCAAGGATTGGTTGATTGCCCCCCAGTTTGCCTCCTGGTGAA14.3478260869565215No Hit
CGCCTAAAGGCCTGCAGTCAACGAGTGAGGAGAGGGCAGACTAAGATTAG14.3478260869565215No Hit
CACCCAGATGCTGTTAATTTGCTGTTTACCCAGTTGCATCATCAGTACAA14.3478260869565215No Hit
CAAATCAGTAGAACGTTGAACCAATGAACAACTGAAAACAAGAACTGTTT14.3478260869565215No Hit
GCTTGAACCGGGGAGGTGGAGGTTGCAGTGAGCCGAGATCGCACCTGTCT14.3478260869565215No Hit
GCCTGGCCAAGACGGTGAAACCCTGTCTCTACTAAAAATACAAAAATTAA14.3478260869565215No Hit
GCAGCGCCCTGGTCGAACAGGCTGTCGCCTTGGATGGCGTGCGCATGCGC14.3478260869565215No Hit
GAGTTCACCTGGTGTATTAAAGTGAATAATCATAAACCACTCACCTTTGT14.3478260869565215No Hit
GGAACGCGCTGCCTGAAGATGCCGCGACGTGGAAAGATCTTGCAACAAAG14.3478260869565215No Hit
AGTTTACTGATTTAAAGATTGAAACACAGGCCTCGCATCAGTGTTTCTTT14.3478260869565215No Hit
GAGGCCGCTGACCTCTGCAAGGCTTTCAATAGCACCTTGCCCACAATCTG14.3478260869565215No Hit
ATAAGCCCCTCTGCAAACTGTAGGCAATGCCCCTCTTTTTATTAGCAGAA14.3478260869565215No Hit
GTGCAAGGGCTGGCTTTTCATAGAAACAAAGACTGGTCTAGACACAAGCC14.3478260869565215No Hit
CCTCTACCTCCGGGGGTCCTGGCGCTGCAGCAGGGACAGGCCCTGTCTCT14.3478260869565215No Hit
CATATGGTCTTCGTGCCGTTCTTCTCCTTGCTCATCATGATTCCAGCAAC14.3478260869565215No Hit
GCTAGATATTTCACCCTTCTACAAAGTTCAATATTGTATTTTTGCCCACT14.3478260869565215No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)