FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003667843

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003667843
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length146
%GC61

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCTTGGCGTTCTCGACGCCGTACAGCGCCAGCGGATCGCTGAGCCATAG211.11111111111111No Hit
GCCGTCGGTGGCGTCTGGGCCGACCAACTGCTCGGGCTCGAAGGCGTCCA211.11111111111111No Hit
CCACGAGCAGGGCCATCGAGGTGGCTCCTGGGTCCTGGTGTCCCTTGCTT211.11111111111111No Hit
CTAGCAGGAAGGTTTCCAGGAGGGGTGTAAGATACTAGCCTCACTTTGCA15.555555555555555No Hit
GAGTTAACTTATGGCCTCTAAAGGTATTAACAAAGTTATTCTGATAGGGT15.555555555555555No Hit
GCAAGCGGCCGCGTCGGTGGTCCGCGCGGTGGTACCTGATATGCGCCAAC15.555555555555555No Hit
CCGATGTTGATCGTGTTCGTGTGCAGGGTGCGGCCGGCGGCTCGAAGGGT15.555555555555555No Hit
CCTCCGGAGATATCGATGTGGCTGCCCGTGGTGTACGAAGACAACGGCGA15.555555555555555No Hit
GAATCCGGTAGATGCCGCGTGTAGCGATGGACGACACGTTCACGATCACG15.555555555555555No Hit
GTGCTCGGCGAGGAGCTCGGCCTGGTGGGCACCCTGCTGGTCGTCGGCCT15.555555555555555No Hit
GGGTCTCCTCAGTGGTGGTCGTGCTGACGGTCGGGCCCTGTCGTCGCGCC15.555555555555555No Hit
CCGAAGGCAAGGAATACGTGGTCAAGGATGGCGACGTTCTCAACTTTCTG15.555555555555555No Hit
GCCTGATCCCAAAGATAGTTGCGTTGAGATTCATTGCCGACCGCTTTAAA15.555555555555555No Hit
ATAACAGCCATAGTAAAGGTGTTTCAATTCTGCCAGCCAACTACCTTATT15.555555555555555No Hit
CTATAGGTGGGCCCCGATAACTTCATCGGCGCCATTCAGGGTGTCATCTC15.555555555555555No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)