FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003667844

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003667844
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length146
%GC61

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTTCGGGACTTTGTCGTCACGCGCATCGAAGCGCCAACGCTGCTCGACG211.11111111111111No Hit
GCACCTTCTTCTTGCGTCTATCGACGGTTATCAAAACCGACGGCGAGCCC211.11111111111111No Hit
GCATCCGGCACCGAGGCGTTCCACCGGACTGGACGTCCCTTCGCAGAACA211.11111111111111No Hit
GGGTGGCTCCCGTCCCCGAGCCGCTCCTGGGCCTGGCGGTCCTCGCGCTC15.555555555555555No Hit
ACACAGCACTTTGCGGAAGATGTAAGTCAATGTATAGAGTGCGCTATCTG15.555555555555555No Hit
GGCCATGCCGGCGGCATGCAATGCGATCAGGCCCGGCGCCATGACGCAGC15.555555555555555No Hit
GGGTCTGGAATAGGTCCAGAAGGAGTCTGGAAGCCCCACAGCCTGTGGCT15.555555555555555No Hit
AATTTGCACCGAAGGGCGTGCGCGTCAACGGCATCCTGATCGGCCTGGTG15.555555555555555No Hit
CCAGCAGCTGCTGCGCCCCCGTCCTCGCCGGTGTGATGACCCTGTCGGCC15.555555555555555No Hit
GTCATGGAGCATCCGGACGTAGGCGGACTCTGCGGCATAGGCGACTCCGG15.555555555555555No Hit
ATCAACAACAAGTAATTCGGGATATTGCCAATGAACAAATTCGACCACAG15.555555555555555No Hit
ATGCCGACGTTGATGATCATCTGCCCGAGCAGCCAGACCACGATGCCGAA15.555555555555555No Hit
GTGTAGCGATTACGTTGACGGCCGCAGGTGTGCACCTGGGGCCGGTTGCG15.555555555555555No Hit
GATCCGCCGTTCACTGTTTCCGACGCTGTGGTGCTGCCGCGCGGTGCTGC15.555555555555555No Hit
GTATTGCCCGGAGATGGCGAATTACCTGAAAACTGTCTGCCCTGTTGTGG15.555555555555555No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)