FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003667845

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003667845
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25
Sequences flagged as poor quality0
Sequence length146
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGCGGCACAACGGGCCATTTGTACGGTTAATGCTCCGAGCCTGTTCCAC312.0No Hit
CCATTTTTCTGTTTAAAAATCCCTACAGCTTTTTCTTCTTTACCATTGCT28.0No Hit
CCGAAGGCAAGGAATACGTGGTCAAGGATGGCGACGTTCTCAACTTTCTG28.0No Hit
CCCCTCGATAGCGATCATCCATACCATAAATCGTCGTGTTGTACTGATCG14.0No Hit
AAACATATGTAAGTATGTGGTTTAATTACATCATAGCAGGTACAGAACTG14.0No Hit
GAGTTAACTTATGGCCTCTAAAGGTATTAACAAAGTTATTCTGATAGGGT14.0No Hit
TCCTATTGGGATGGGAGAGGACAGATAAAATAGCCTCTAAATATTGATGT14.0No Hit
CATCGCGGCGAATACAGTCATCACGCGTTAGCGCAATACCACGCCACAGC14.0No Hit
CCTCCGGAGATATCGATGTGGCTGCCCGTGGTGTACGAAGACAACGGCGA14.0No Hit
ATTTGGAGAGCTGGCTAGAACCGTGGGACGGGACCCCGCAAGAATCTGAC14.0No Hit
GCCACACGTTCCCAGCGTCGTGTCGGTTTACCCGCACGCGGACTGGCAGG14.0No Hit
CTTCCTGAACAATTTTCCGCGCCCGTAATTTGGCATTTTCCGCTTGTTCG14.0No Hit
GAGTCAGGCTGTTACTGGTTGACTCGTCAGGTGTGAGCAGCACCGTGCGG14.0No Hit
GTCGAATCCAAGATACCACTTGCTATCGCTAGAGAAGAGGTACGAGACGA14.0No Hit
GTGGTGAAGAGGTCAACGAAACAGCCGGAGTCCAGCAGCCGACGTACCGC14.0No Hit
GTTTCATGCGGGCTATTCTATGCCCAACACTTCGTCGATGGAACGGATTT14.0No Hit
GACGGGCCCGGCGTCTTCCGCGCCTGCCTCCGCACCCGCCAGCGGGGCGG14.0No Hit
GCCTTTCATAGAGCGGCCGCAGCGTGGTCGTGTGCACATCGCACAGCAGC14.0No Hit
GGCAGTACCTCGTCAACCACGAGGTCGGCCACGCCATCGGCTACGAGCAG14.0No Hit
ATATCAAATAATAAAAATAATATAGCAAAAAGAAAGAATGAAATACTAAA14.0No Hit
AAAATCAACAACCCCCGGAGGTGCAGGGATGGCAACGATTCAAGAAAAAA14.0No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)