FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003667893

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003667893
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length146
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGTAGAAGCTGCACATCTGGCCCAGGTCCACGGCGTTGCCGTGCGAGAA28.695652173913043No Hit
CCTCCCCACAATGTAGAAATTGGCACCCGCAATCATCCGGGACCTGCAGT28.695652173913043No Hit
GGAGTCACCTGCCCCGCCATCCTCAAAGCCTGCCACAAAGAGGGTGTAGC28.695652173913043No Hit
GTGTTACTCCGATATGTAATCCATTTCACTGGCTGAGTTTGGCCCCTAGC28.695652173913043No Hit
GGCCAGGATGTTCTCCTTTGATTTTTGGGCGATACTCAGAGCAGAAGAGG28.695652173913043No Hit
GACAAGCGCCAAGCCCATCTTTGTGTGCTTGCATCCAACTGTGATGAGCC14.3478260869565215No Hit
ATCTCAAGCAGCGCAATCTGTCCTGAGGCTGGCAGCAGGGCCAGGGCCAG14.3478260869565215No Hit
GTACATGGGCGCACCATCTCTGTGATCCTGTTCCTCAACAAGCAAGATCT14.3478260869565215No Hit
GAGCTAAGCTCAGGCTGTTCCAGGGAGCCACGAAACTGCAGGTAGTGATG14.3478260869565215No Hit
GGATAGCGATGATTATGGTAGCGGAGGTGAAATATGCTCGTGTGTCTACG14.3478260869565215No Hit
GGCAGCAGGCGCGCAAATTACCCACTCCCGACCCGGGGAGGTAGTGACGA14.3478260869565215No Hit
TCTTTGATGTGAAAGGGGCAGCACAGTCATTTAAACTTGATCCAACCTCT14.3478260869565215No Hit
TCAGGGCCCTGTTCAACTAAGCACTCTACTCTCAGTTTACTGCTAAATCC14.3478260869565215No Hit
ACCCTGGGGTTAGTATAGCTTAGTTAAACTTTCGTTTATTGCTAAAGGTT14.3478260869565215No Hit
GAACTACCACCAGGACTCAGAGGCCGCCATCAACCGCCAGATCAACCTGG14.3478260869565215No Hit
GCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAG14.3478260869565215No Hit
CCCCCGAGCGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTC14.3478260869565215No Hit
GCTGAGTATGATAGTGAGGTGGGCTGGGGTTCCACGGTACTCACCACAGG14.3478260869565215No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)