FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003667894

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003667894
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length146
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCTACTACACCCTCTGGGCGGCTGGACCAAGGATGACGATGTGCCTCTA28.695652173913043No Hit
CACCTACACGGTGCTGGCGCCGGAGCAGCGCGGCGCCGGCGCGTCCGCCC28.695652173913043No Hit
GTGGAAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAA28.695652173913043No Hit
ACCTTTTAGTCTGCAAGGTAACGTCATATTCAACTGCCTAATGTGCCGTT28.695652173913043No Hit
CCTCGGGCCCCAGTGTGCCTGTGCCCGTCTTCTGTGACATGACCACCGAG28.695652173913043No Hit
GGCTGAGATCGAGAAATTCGATAAGTCGAAACTGAAGAAGACAGAGACGC14.3478260869565215No Hit
ATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGC14.3478260869565215No Hit
TTGAAATACTCTTCAATGACATCCTTGGCCTGAGACTCCTTGCCATAGTC14.3478260869565215No Hit
AGTCATCACAGTCTGGTTTCTTGATATCCTGAAGGAAGATTCGGCCACCT14.3478260869565215No Hit
GAATAATCTCCCATATTGTAACTTACTACTCCGGAAAAAAAGAACCATTT14.3478260869565215No Hit
ATCAACGCAGAGTACTGGGGAATAATTGCAATCCCCGATCCCCATCACGA14.3478260869565215No Hit
GTTCTGTAATCGATAAACCCCGATCAACCTCACCACCCCTTGCTCAGCCT14.3478260869565215No Hit
GGCCTGCACCTGTGTCCCACCCCACCCACAGACGGCCTTCTGCAATTCCG14.3478260869565215No Hit
GGTCCTCTCCGGGCTCGGGAGTAGCATCCTCAGGAGTAGTGTAGCGAGCA14.3478260869565215No Hit
GGTGAGCGCAAGCGACGGCCACATGGGGACCGTAAGTCCTGTGAGATGGG14.3478260869565215No Hit
GTCCCAACAGCTGACAGCCAGGAGCCACTCTCCCAGCTGCAGGCCTTTGT14.3478260869565215No Hit
GTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGC14.3478260869565215No Hit
GGAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTGA14.3478260869565215No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)