FastQCFastQC Report
Tue 10 May 2022
EGAF00003667962

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003667962
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences211333
Sequences flagged as poor quality0
Sequence length146
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG4390.20772903427292472No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT3360.1589907870517146No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAG3130.14810748912853175No Hit
GCATAATATAGCAAGGACTAACCCCTATACCTTCTGCATAATGAATTAAC2870.13580463060667286No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA2250.10646704490070173No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)