FastQCFastQC Report
Tue 10 May 2022
EGAF00003667982

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003667982
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15124
Sequences flagged as poor quality0
Sequence length146
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT370.2446442740015869No Hit
GTATATGATGTTGCTCTGCAAGAACCTTTAGGCTAGGCCTTATTAACCTC280.18513620735255223No Hit
TACCAGTACTGATTGCCGAGCAAATCTGTGAATGGCGACTATGCGCCTAG250.16530018513620737No Hit
GTACATGGGGGGAATTCACACCGGCGCACGCCACAGGCGTCATACTTCCC240.15868817773075905No Hit
GTATAAGGTGATCGCAGGTTGTGCAATCATTGCTCAAAAGGGTGTACACC220.14546416291986247No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT220.14546416291986247No Hit
GTACATGGGATGCGACTGTTCCCCGGGGTCAGGGCCGCTGGTATTTGCTG200.13224014810896587No Hit
GATAAGAACCCTCCAGCTCGGGGCCTCAAACCGATATTCCATGTGGGCCA200.13224014810896587No Hit
GTACATGGGAGGCTGGAGGAAGGGGAAAAGGCCCTGGGAGGATGAGTGGC200.13224014810896587No Hit
ATTATTAACTGCGCAGTTAGGGCAGCGTCTGAGGAAGTTTGCTGCGGTTT200.13224014810896587No Hit
ATTAAAGACATTTAACTGTGGAAAACTGTTCTGCACCTAAAGCTAAAGGT190.12562814070351758No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA180.11901613329806929No Hit
ATTTAAGAATATTTGTACAAGAACAAAAGTTTGGAAAGAAACTGACATTC180.11901613329806929No Hit
GCTGTAAAGAGGGGCGTTGAGTCCGTCCGACTTCACTGCCCCCTTTCAGC170.112404125892621No Hit
TCTCAACAGCGAGTGTATTTAGGACGCACGCAGCCCTATTACGAGGGTTG170.112404125892621No Hit
GTCTCAGGGGATCTGCATATGTTTGCAGCATACTTTAGGTGGGCCTTGGC170.112404125892621No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG170.112404125892621No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG160.10579211848717271No Hit
GTACAGAACTGAGTGTCATGTGTCCAAAGTTAAGCTCTGCACCTGTTACA160.10579211848717271No Hit
CTATAGTCATCGTCCATAACACGATCTAGTGAAACCTTCAAGCATGAATT160.10579211848717271No Hit
CTTATGTATTTGGGGTTTACCGTGGGCTCAATGCCGGCAATCCACAGATA160.10579211848717271No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG160.10579211848717271No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)