FastQCFastQC Report
Tue 10 May 2022
EGAF00003667983

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003667983
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14714
Sequences flagged as poor quality0
Sequence length146
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATAAGGTGATCGCAGGTTGTGCAATCATTGCTCAAAAGGGTGTACACC270.18349870871279053No Hit
ACGCAGAGTACATGGGATGCGACTGTTCCCCGGGGTCAGGGCCGCTGGTA240.16310996330025826No Hit
GTACATGGGATGCGACTGTTCCCCGGGGTCAGGGCCGCTGGTATTTGCTG220.14951746635857008No Hit
GCTGTAAAGAGGGGCGTTGAGTCCGTCCGACTTCACTGCCCCCTTTCAGC220.14951746635857008No Hit
ATCTCATATGGCGGAGTAGAACGTCTTTAGCGGCCTGTCATATTAACAAC210.142721217887726No Hit
GTATATGATGTTGCTCTGCAAGAACCTTTAGGCTAGGCCTTATTAACCTC190.12912872094603778No Hit
GTGCTAGCCCGTCGAGACTGAAAAGCTATAACCCGCAGACCCGAGCGAAA190.12912872094603778No Hit
GTACTGATTGCCGAGCAAATCTGTGAATGGCGACTATGCGCCTAGTCAAC190.12912872094603778No Hit
CTTATGTATTTGGGGTTTACCGTGGGCTCAATGCCGGCAATCCACAGATA190.12912872094603778No Hit
GTATCAACGCAGAGTACATGGGGGGAATTCACACCGGCGCACGCCACAGG180.12233247247519369No Hit
ACATTATACACTTATGTATTTGGGGTTTACCGTGGGCTCAATGCCGGCAA180.12233247247519369No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT180.12233247247519369No Hit
ATTATACACTTATGTATTTGGGGTTTACCGTGGGCTCAATGCCGGCAATC160.1087399755335055No Hit
GTACATGGGGGAATTCACACCGGCGCACGCCACAGGCGTCATACTCCAAG160.1087399755335055No Hit
GTACATGGGAGCACCGAAGACTGCGATGACTTCTGCACTGACCCAGGGGC160.1087399755335055No Hit
ATTAAAGACATTTAACTGTGGAAAACTGTTCTGCACCTAAAGCTAAAGGT160.1087399755335055No Hit
GTCTAACGCCTACCAGTACTGATTGCCGAGCAAATCTGTGAATGGCGACT160.1087399755335055No Hit
ATTATTAACTGCGCAGTTAGGGCAGCGTCTGAGGAAGTTTGCTGCGGTTT150.10194372706266142No Hit
GTACATGGGCAGGACCATCAATGAGGTAGAGAACCAGATCCTGACCCGGG150.10194372706266142No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)