FastQCFastQC Report
Tue 10 May 2022
EGAF00003668043

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003668043
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences312383
Sequences flagged as poor quality0
Sequence length146
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGTAGGTGGTTTCATGGATGCCAGCAGACTCCATCCCGATGAAGGATG4890.15653860805485573No Hit
GGTACATAGTGGTGCCCCCTGATAGGACATTGTTAGCATAGAGGTCCTTC4700.15045633085027035No Hit
GCCTTGCCCCATGCCATCATGCGTCTGGATCTGGCTGGCCGAGATCTCAC4220.1350905779123704No Hit
GTACATAGTGGTGCCCCCTGATAGGACATTGTTAGCATAGAGGTCCTTCC4110.1315692595307683No Hit
ACATAGTGGTGCCCCCTGATAGGACATTGTTAGCATAGAGGTCCTTCCTG3850.12324614335607251No Hit
GTGCTGGACTCTGGAGATGGTGTCACCCACAATGTCCCCATCTATGAGGG3820.12228578379745375No Hit
GTGTGGAGCAGCCCAGCCAAGCACTGTCAGGAATCCTGTGAAGCAGCTCC3620.11588338673999546No Hit
GTATGTGGCTATCCAGGCGGTGCTGTCTCTCTATGCCTCTGGACGCACAA3360.10756027056529965No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)