FastQCFastQC Report
Tue 10 May 2022
EGAF00003668044

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003668044
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences312383
Sequences flagged as poor quality0
Sequence length146
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGTAGGTGGTTTCATGGATGCCAGCAGACTCCATCCCGATGAAGGATG4820.15429776908474532No Hit
GGTACATAGTGGTGCCCCCTGATAGGACATTGTTAGCATAGAGGTCCTTC4300.1376515367353537No Hit
GCCTTGCCCCATGCCATCATGCGTCTGGATCTGGCTGGCCGAGATCTCAC4220.1350905779123704No Hit
GTACATAGTGGTGCCCCCTGATAGGACATTGTTAGCATAGAGGTCCTTCC3970.1270875815905475No Hit
GTGCTGGACTCTGGAGATGGTGTCACCCACAATGTCCCCATCTATGAGGG3960.12676746173767459No Hit
GTATGTGGCTATCCAGGCGGTGCTGTCTCTCTATGCCTCTGGACGCACAA3500.11204194850552046No Hit
ACATAGTGGTGCCCCCTGATAGGACATTGTTAGCATAGAGGTCCTTCCTG3440.11012122938828298No Hit
GTGTGGAGCAGCCCAGCCAAGCACTGTCAGGAATCCTGTGAAGCAGCTCC3160.10115787350784135No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)