FastQCFastQC Report
Tue 10 May 2022
EGAF00003668045

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003668045
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences305845
Sequences flagged as poor quality0
Sequence length146
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGTAGGTGGTTTCATGGATGCCAGCAGACTCCATCCCGATGAAGGATG5130.16773202112181007No Hit
GGTACATAGTGGTGCCCCCTGATAGGACATTGTTAGCATAGAGGTCCTTC5110.16707809511353788No Hit
GCCTTGCCCCATGCCATCATGCGTCTGGATCTGGCTGGCCGAGATCTCAC4270.139613202766107No Hit
GTACATAGTGGTGCCCCCTGATAGGACATTGTTAGCATAGAGGTCCTTCC4100.13405483169579363No Hit
ACATAGTGGTGCCCCCTGATAGGACATTGTTAGCATAGAGGTCCTTCCTG3890.1271886086089359No Hit
GTGCTGGACTCTGGAGATGGTGTCACCCACAATGTCCCCATCTATGAGGG3560.1163988294724452No Hit
GTGTGGAGCAGCCCAGCCAAGCACTGTCAGGAATCCTGTGAAGCAGCTCC3470.11345616243522046No Hit
CTCTATGCCTCTGGACGCACAACTGGCATCGTGCTGGACTCTGGAGATGG3350.10953260638558748No Hit
ATCCCACCCTGCTCACGGAGGCACCCCTGAACCCCAAGGCCAACCGGGAG3230.10560905033595448No Hit
GTGCTAGGGCCGTGATCTCCTTCTGCATTCGGTCGGCAATGCCAGGGTAC3130.10233942029459367No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)