FastQCFastQC Report
Tue 10 May 2022
EGAF00003668046

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003668046
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences305845
Sequences flagged as poor quality0
Sequence length146
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGTAGGTGGTTTCATGGATGCCAGCAGACTCCATCCCGATGAAGGATG4770.1559613529729111No Hit
GGTACATAGTGGTGCCCCCTGATAGGACATTGTTAGCATAGAGGTCCTTC4610.1507299449067338No Hit
GTGCTGGACTCTGGAGATGGTGTCACCCACAATGTCCCCATCTATGAGGG4210.13765142474129052No Hit
GCCTTGCCCCATGCCATCATGCGTCTGGATCTGGCTGGCCGAGATCTCAC4000.1307852016544328No Hit
GTACATAGTGGTGCCCCCTGATAGGACATTGTTAGCATAGAGGTCCTTCC3960.12947734963788848No Hit
ACATAGTGGTGCCCCCTGATAGGACATTGTTAGCATAGAGGTCCTTCCTG3420.11182134741454006No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)