FastQCFastQC Report
Tue 10 May 2022
EGAF00003668060

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003668060
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences113295
Sequences flagged as poor quality0
Sequence length146
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCATTACAGCCTGCAGGACACCTTGGGCCAGCTTGGTTTTACTCTAGATT1350.11915795048325169No Hit
GACCAGACTTCGCTCGTACTCGTGCGCCTCGCTTCGCTTTTCCTCCGCAA1250.11033143563264046No Hit
GGAATGTACAGTGCATATTGGCGGCGCACGCCTCATTACGATTCGCCTGC1180.10415287523721259No Hit
CCTTGGGCCAGCTTGGTTTTACTCTAGATTTCACTGTCGTCCCACCCCAC1170.10327022375215145No Hit
GTACATTCCACAAGCATTGCCTTCTTATTTTACTTCTTTTAGCTGTTTAA1170.10327022375215145No Hit
GTACATGGGAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTA1170.10327022375215145No Hit
GTATAAATGGAGGCCGCAATCATGACACACAGACATGACATTAGCTGGAT1160.10238757226709035No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)