FastQCFastQC Report
Tue 10 May 2022
EGAF00003668072

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003668072
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8807
Sequences flagged as poor quality0
Sequence length146
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACACACACACACACACACACACACACACACACACACACACACACACACA2512.850005677302146No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT1932.1914386283638017No Hit
ATCTAATTCACCTCCTATTAGGAGCCGATCGTGCTTGTGCGCCGGCAAAA270.3065743158850914No Hit
CCTATTAGGAGCCGATCGTGCTTGTGCGCCGGCAAAACTTTTCAGGCGAA180.2043828772567276No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA170.19302827296468716No Hit
GTACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATAT170.19302827296468716No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGATGCGTG160.18167366867264675No Hit
CATATAACCACATTCAAATTGACCTCCCTCAGGAAGCTAAGAAATACTAT160.18167366867264675No Hit
GTCCTACACTATCTTGGATATGATATGGCGCACTACACATGCTAGCCGCT150.17031906438060634No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG150.17031906438060634No Hit
GTACATGGGAGCCCGGGTCGATTATAACAACGGTGCAATCTCAGCTAAAC150.17031906438060634No Hit
AATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGATGCGTGCATT140.15896446008856593No Hit
GAGTATACTTTAACCTGGCTTTTAAAGCAGTAGTAACTGCCCCACCAAAG140.15896446008856593No Hit
ATCTTAAGTTGATCCTCCTACTCCGTGGAGAAACAGGCTGAGAGGGGGGA140.15896446008856593No Hit
ACACATGCTAGCCGCTGGGGAGATTAGCTCGAGTTGCCCCTTTGCCCGAT130.1476098557965255No Hit
AAGAAATACTATCTCGGCAATAGGATTGTAGCCCAGGATGAGTCCCTCAG130.1476098557965255No Hit
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGC130.1476098557965255No Hit
ACGCAGAGTACATGGGATGTGGAGAAGAGCCAATTTAACAAACTAGGAAG120.13625525150448506No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGA120.13625525150448506No Hit
GTACATGGGATGTGGAGAAGAGCCAATTTAACAAACTAGGAAGATGAAAA120.13625525150448506No Hit
ATATAATTCTAACGCTTAAATCATGTGAAAGGGTTGCTGCTGTCAGCCTT120.13625525150448506No Hit
ATGTAAAGAAACGGGTCACTCCATCGATGTTCTTCTTCGGATCACGCCCG110.12490064721244465No Hit
TGCTAGCCGCTGGGGAGATTAGCTCGAGTTGCCCCTTTGCCCGATCCCGG110.12490064721244465No Hit
CGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCC110.12490064721244465No Hit
GTATCAACGCAGAGTACATGGGATGTGGAGAAGAGCCAATTTAACAAACT110.12490064721244465No Hit
GGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATT100.11354604292040424No Hit
GTGTTAGATATTGAGGCTGCTTCGTGTCGGCACGAAGTGTCTTCCGATGC100.11354604292040424No Hit
GAGTACATGGGATAGCCTGCCTTCAATTTTGATCCTTTATTCTTTCTATT100.11354604292040424No Hit
ATCTTGGATATGATATGGCGCACTACACATGCTAGCCGCTGGGGAGATTA100.11354604292040424No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC100.11354604292040424No Hit
GCCCAGGATGAGTCCCTCAGCGTGACGCAGTAAACTAGTAGCATCCCGAT100.11354604292040424No Hit
GGGTATAACTTAGCCCCATCATTATTTAGAGAATAGAGGAGGAAGAAAGA100.11354604292040424No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG100.11354604292040424No Hit
CACTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCACGATCTCGGCTCAC100.11354604292040424No Hit
CTACCTCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTT100.11354604292040424No Hit
CTCAAGCGTTGAGCGGAATGCAGCAATCAATGTCGTCGGAAGATCCTGAA90.1021914386283638No Hit
CTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCCAT90.1021914386283638No Hit
ATGTGGAGAAGAGCCAATTTAACAAACTAGGAAGATGAAAAGGGAAATTG90.1021914386283638No Hit
CCCTCAGGAAGCTAAGAAATACTATCTCGGCAATAGGATTGTAGCCCAGG90.1021914386283638No Hit
GTACATGGGACGGCCGGTACAGTGAAACTGCGAATGGCTCATTAAATCAG90.1021914386283638No Hit
CCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCG90.1021914386283638No Hit
ACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACG90.1021914386283638No Hit
TTTATGAACTAGCCTATCGCAGACGGTATCAACAGGAACATCCTCGTGTT90.1021914386283638No Hit
ATTCTGTACATTGGGGCAATCTCAAAAGTAGTAAAATTTTTTTTGTCTTT90.1021914386283638No Hit
GAGTACATGGGATGTGGAGAAGAGCCAATTTAACAAACTAGGAAGATGAA90.1021914386283638No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT90.1021914386283638No Hit
ATATTGAGGCTGCTTCGTGTCGGCACGAAGTGTCTTCCGATGCAGTGTCC90.1021914386283638No Hit
GATCAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGGGCGGG90.1021914386283638No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)