FastQCFastQC Report
Thu 9 May 2024
EGAF00003668213

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003668213
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4
Total Bases584 bp
Sequences flagged as poor quality0
Sequence length146
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGCCTGCTGCTCGAGCTCGACCGCCGGTTCTCGCCGTTCTACTGGACGA125.0No Hit
AAGTTGCCTATTATTCCTGGAACAAAACCTGTGTCTTTCCTTCATCACAC125.0No Hit
CGGCCAGCCTTGGCTGAGGCGTAGATTACTGGCACGTCGAGCAGAGAGGC125.0No Hit
AGACGTCGCGGTAACGGTGCTGGAAACAGAAACGGGCCGCTACTCTGACA125.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)