FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003668284

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003668284
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32
Sequences flagged as poor quality0
Sequence length146
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCCGAGACCGGCGACGCGGCAGCGGGCATCCAGTACCTCGAACGCATT412.5No Hit
CGCGATAGCTCCTAAAGATCCTGCAAAATAGAATGGTAATCTATGCGAGA39.375No Hit
GAGATGTAAAGAATGACTACAGCGTTTAATCGAATCCATCTTATCGTTAT26.25No Hit
CCACACCCCCCATCCTGTGCCCATATAAACCCGAGAGACTGTCTCTTATA26.25No Hit
GCAGCCGGATGTCTTGCTGCGGGGTGTCCTGGCCGGTGGTGGGCTCGGCG26.25No Hit
ATCAAGAGGCCCCTGTTGTTTTTCTCTCTATGGACTCCATGTTTTGTAAA26.25No Hit
CTTCAGTATTGTTCAGGCTGACCTACACTGCCCAATCCTTCCATCAATGG13.125No Hit
GGTTCTCGCGGAGGAGCTGGCGGAGCGGGCAGTGGCTCCAACGTCGTCAC13.125No Hit
GTACCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAATGTGCGT13.125No Hit
CCGGGCCCCAACGGACGGTGGTTGGAATGGCAGGAAAAACCCAGTCAGCT13.125No Hit
GCTGCGGAGTGATCCATGCGCCGTGATCCGGTCACGGGGATGAACGCCCC13.125No Hit
GTACTGACGGTAATGGAGTTCAGGATGCCGGTGGGACCGGTGGGGGTTGT13.125No Hit
CTCGTCCCCCCGGCCGCGCTCTGCGTGCACATGCTCGTGGCCGGCCGCCT13.125No Hit
ATGCCAGCACCAGCGGGCGCCGCGGCAGCAATGCCTGCGGCACCGGGGCC13.125No Hit
TCCTACAAGCATTAATTAATTAATACGCTTTAGTAGATATGCTCGCCTGT13.125No Hit
AGGTAGTCGGGGTCACGCTCGACGACGGTTCCTTCGGCGATTCCGCCTTG13.125No Hit
GTGGTCTTTTGAACCCACCCTCCCGATTTCGANNTACCTCACGGCTCTCG13.125No Hit
GCTGCGGAGTGATCCATGCGCCGTGATCCGGTCCCGGTCGTCATCGCCCC13.125No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGT13.125No Hit
CACTACAAAAAGAGTGTTTCAAACCTGCTCTGTGAAAGGGAATGTTCAAT13.125No Hit
CTTTACTGCCTTTCAGATAAGCTTATTATAGCATGATGAAACTGACTAAT13.125No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGG13.125No Hit
GATTATAATAGCTCTGAGGAAATGCTTTAAAGTCTCTGCCTCTTATATTA13.125No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)