FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003668370

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003668370
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51
Sequences flagged as poor quality0
Sequence length146
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATACCCGTACTCCGGTGACCTATCGGGAAGCTACACCGGCTCCTACAGGG35.88235294117647No Hit
ACCCGAGGGTTTAGTCCGTAGGACAACAACAATCAGAATCATAGGCTAGC35.88235294117647No Hit
GTTTTTACGTTATTTGCGGATTAACGATTACTCGTTATCAGAACCGCCCA23.9215686274509802No Hit
GTGTTTCATGTGTATACTTGAAGGAGCATGAGTTTCGTAAACATGCTGCT23.9215686274509802No Hit
GCCCGTGCCAGCGGCCGTCGGGCCCGCGGGGACGCCGACGAAGACTTTGA23.9215686274509802No Hit
CCTTCAACGATGTGCCGTTCCCGCTCGAGGGCTGAAGAAACTCGTCAAAG23.9215686274509802No Hit
CGACACGGTTGAGGATGCTTCGACAGCCATGACGTGTTCGGTTGAGTGCT23.9215686274509802No Hit
CTTCGACGGTGAGTCCGAGCGAGCGCCTATCTACGCCCAAGCGGTCGCCA23.9215686274509802No Hit
GAGGATGCCAATGACGATCTCAACGAGCAGGGCGATGATCGCCAGCTTGA23.9215686274509802No Hit
CACTAATCAACCTCTCTGTATCCTCTCTCCCTCCCTTCCCAGCCTCAAAT23.9215686274509802No Hit
CCCACGAACCGGATCCTGGCCGGCTTCGCCACGGCTCCCAGCTGATCTTC11.9607843137254901No Hit
GAGGATGGTTTCGCCGTTGTTGTCGAGGAGTTGCTGGCATCTCGATAATC11.9607843137254901No Hit
TTACTAAGTGTGGTGCACATGTGCTATGGGTAGGCCTGCATGTAAAAAGA11.9607843137254901No Hit
CTGCGGTCACACTGGTGACTCTCGCCGGGTCCGGTCTCCGCAGAGTACTT11.9607843137254901No Hit
GATGGGTAGTTTGCAAATATTTTTCTCTCATTCTGTGTGTCATGTCTTCA11.9607843137254901No Hit
ACCCTGTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTTA11.9607843137254901No Hit
GCGCGGGCACGGCCGATCTCTGGGCGATCGCCAACGAGACGGTGCGCCCC11.9607843137254901No Hit
CCCACGAACCGGATCCTGGCCGGCTTCGCCACGGCTCCTAGCTGATCTTC11.9607843137254901No Hit
GTCCGGGCACGTCATTATGAGTGAGTTCGCAACCACTGGTGACGGTGTTC11.9607843137254901No Hit
AGACCAGCCCATGGGGACTGCTGCTCCAACCGGGAGCGCTCCAGCGTCAT11.9607843137254901No Hit
ACACGGACGGTGACAAGCCGGTACCAGAATATCAACTGGTTACCCATCGA11.9607843137254901No Hit
CGGCGCCACCACCACGCGCAGCATCGAATGGCGATCGGCGTTGTGCCACG11.9607843137254901No Hit
CAACCAGATTTTATGAGAACTCACTTACTATCACAGCAAGAGAACAGCAA11.9607843137254901No Hit
GCTCAAGCCCGCAAGCACGACGCCGACGTCGTTATCGCCTCTGACCCCGA11.9607843137254901No Hit
CCACAATCATCAGGGATTGCGCATAGTCTTTATTGATTTGGAGATACGTT11.9607843137254901No Hit
GGTATCTCACGACGAAGGATTCCCACCTGTTCGCCTGGGGCGTCGCCAAT11.9607843137254901No Hit
TCACTGACGCTGTCCACGAGCTTGGCGGCACGATTGCTGTCCAGTTGGGC11.9607843137254901No Hit
CCCACGAACCGGATCCTGGCCGGCTTCGCCACGGCTCCAAGCTGATCTTC11.9607843137254901No Hit
GCATTAAGGGCAAGGGGTCTCCTGGCGAGAATGGCGGGAAAGCGGGTGAC11.9607843137254901No Hit
CCCGCTCCACACGGCTTGGCTCAAGGAGATTAAGGTCATATAGAGAGGGT11.9607843137254901No Hit
GTCTTCGACCATCGAACGCTCAGTTGTCAGCGTCTCCGTCGAGGTGGCAA11.9607843137254901No Hit
GTTTCACTTCGGTGCCAACCAGAGAGAAGTCGAGACCTTGTGGCGTCGCT11.9607843137254901No Hit
TTCTACGGATATCCCGGCATCACCGCCACAAGAAGGGCTCAGATGGACTC11.9607843137254901No Hit
CCATTCGTGTGCTGAAATCCCATTGGGTCGAGCCGGGGACAGGGAGGAAC11.9607843137254901No Hit
ATTGGGGGTAAACTAACTAAAGGTCTAGTTGCTGGTGGGAACCCTGATGT11.9607843137254901No Hit
GGCCACAATGGCGTCCATGAGCGCACCGGGATCCGTGGTGCACGTCACCA11.9607843137254901No Hit
GCGCATTCGCCGTCCTTGCAGGAGATGAAGCCTTGAAGAGCTGTCTCTTA11.9607843137254901No Hit
CCGTCACAACATCATTGACGGCGTCGTCCACGACAAGCTTTACCTGCCTG11.9607843137254901No Hit
GCACCCTTCCTCGGAAGGGGCCGCGGCGAAGTCCACCGCGAGAGGCAGTG11.9607843137254901No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)