FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003668618

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003668618
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14
Sequences flagged as poor quality0
Sequence length146
%GC63

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGCCATCGCCCGGCGCCAGCCGGTGAGTGGCCGGTCGGCCGCGATGTTC214.285714285714285No Hit
CACAATATGCAATCATTTGATTTTTCTTTAGGAACAAGTTTTCGCTGTAG214.285714285714285No Hit
GTCTGGGGAAGAGCAGCTCGCGCAGCCGCTCACCCGGCTCGCCGCGCCAC214.285714285714285No Hit
CCGGACTTCTCGGCGGGCTTGTCGGCGGATTTCTCGGCAGACTTCTCGGC17.142857142857142No Hit
GTCCTCCACCGGGTGGGTGCGGTACCAGTCGATCCACTTGGTGTTCTCGA17.142857142857142No Hit
ACCGTAGTGCGTGGTTATATCGACTGGATGGTACAGGTGCCGTGGAATGC17.142857142857142No Hit
GGGGCATCCACCGCCGCTGCGAGTACCACCGGTACCCCGGCACAGGTGGC17.142857142857142No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG17.142857142857142No Hit
CCTGCACTAAATCAATTTGCCGATCGAACAATTCAAAATGCACCTGTAAC17.142857142857142No Hit
CCCTGTCAATGAGAATTGTCTAGACAAAGAAGGTCCCTTGGTTGAATTAG17.142857142857142No Hit
GCATTCGGCACGCGGGTGCCCTCCGCCAAGCGCTCCCCCAGCGTGTTGTG17.142857142857142No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)