FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003668712

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003668712
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences97
Sequences flagged as poor quality0
Sequence length146
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGCAAATATACTCAAGCCGCTATGGTGACGCTTTTACTTGCTGAAGTAA33.0927835051546393No Hit
ATCCAGATAGCGCCCAGCAGGATCCACGAAATCGGGAAAAGACCGTAGAG33.0927835051546393No Hit
ACATGGTGAAACCTCGCCTCTACTAAAAATACAAAAATTAGCCAGGTGTG33.0927835051546393No Hit
TGTGTGGGGTTTATACGAAGGATGTTGCCGCGACCAAGGTGGAAATGGTG33.0927835051546393No Hit
GTACCGACGTTAGAATCGCGGTCGGCCTCGCCTCAGGGAGTTGTCAGCTC22.0618556701030926No Hit
CCTCTGGCCTCAGCCTCCCAAAGTACTGGGATCATAGGCAGGAGTCACCA22.0618556701030926No Hit
AGATAGTGGCTGGGGCTGCAGTCACCTGAAGCATGACTGGGCTGCAGGAT22.0618556701030926No Hit
CGGCAGCATGCTGCAAAACTCCTTGAACTGCCCCTCGCGCCACAGCTTCA22.0618556701030926No Hit
TATTTCAGCTAAACAAGCATATAGACTATTAGAGCCTTTTTAAACTCCCT22.0618556701030926No Hit
GTCTTGCTCACCAGCACCGCCCGACCCTTGAGCTTGTTGAGCGCCTGGGT22.0618556701030926No Hit
GGCTGCTGCCGTGTGATAAGTCAGCGGCGGCACGAGCGCCCGAACCGGCA22.0618556701030926No Hit
GTGCTGGAAGAGATAATTGATTGCAACAGCCAGGTAGTGGTTCGGGTTCA22.0618556701030926No Hit
GGATTACAGGGGCCCGCCACCACGCTTGGCCAATTTTTGTATTTTTAGTA22.0618556701030926No Hit
GGACCTCACGGTGGCCGATGACCGCGGATCAGTCGTTGTCGACGGGGTGT22.0618556701030926No Hit
GCCCTACTTTCTAGTGGTTTCTACCCTGAGTTCCTCTTGAAAAAGAACTA22.0618556701030926No Hit
CCGCGGTCATCAACGCTGCAAGCGGTCGCCAGACTGTCGATGCCGCACTG22.0618556701030926No Hit
CTTTTCTCCTCTGTAATTTTGGCGCAACCTACCACCAAAAGAAGCAATAA22.0618556701030926No Hit
CACGTATGGCGTCGAACGCCGCGACGGTCAACTCCGATTTTATTTCGACC22.0618556701030926No Hit
GACCGGGCACGGGCTGCACCACAGCGACATTGGCGGCTATACGACCCTCT22.0618556701030926No Hit
GTTTCCTTTGCATCCACTCCGCTCCACTGCAGCCCTCCAGGAACAAGCAG11.0309278350515463No Hit
GGTTAGTTCCAGTTAGGGACATATTACAAAGAGAGCTGCTATGGGCTGGG11.0309278350515463No Hit
TCTCGGACGCATGGCGGGTTTCTGCTTAGCTGATGATGTTGGGCAGTTTT11.0309278350515463No Hit
GTTCCGCAGTGGTGCTGCGGGGCGGACCGACGGTAGAGAATACACAAACG11.0309278350515463No Hit
CTCGTACACCGATGCCAGGCAAATTGGCCTGACGGCGCCACTCCGCCTGT11.0309278350515463No Hit
GTTCATTTACAGAGCATAGGCAGAGTAGATTTAGCATAATTCCTAAGGGC11.0309278350515463No Hit
CTTTCCTCCAGGGCATGCTCGCATAATTTTCGGCGGCTAGTTTGCCATGA11.0309278350515463No Hit
GACTGGGCGGCGGCGGTCGCTACTTGAAGCGCCTGCGGATCGGCAAGACC11.0309278350515463No Hit
GTAACGAAGACCGGCACGTGCTTGCGACCGTCGTGGACGGCGAAGGTGTG11.0309278350515463No Hit
GCCTTCATGCCGTAACGCCAGGTGCCGTAGCTGCCGTAATAGCTGCTGGC11.0309278350515463No Hit
CAATATGGCCATGAAAACCGGTAAAAAAGTTATCGGTGCTGGCCCTGGTA11.0309278350515463No Hit
CTTCAATGCCTACTTCATCGAGCAGGATGTGGCGCGAATAGCGCAGCAAC11.0309278350515463No Hit
GCTCAGCCTCCGGACAGTTCACCCTCCTGCATGGGGCCCTGTCGGCGCTG11.0309278350515463No Hit
AACCTAGGTCAAGCCCTTATTTTAAAGATGACACAACAGGGGACCAGGGG11.0309278350515463No Hit
AAATAAAGATGCAGGCCAGGCCCGGTGGCTCATGCCTGTAACCCAGCATT11.0309278350515463No Hit
ATACACCCTGGCACTTCACCCTGCTGACCCCGCTGCAGGACCTGCGCCGC11.0309278350515463No Hit
CTTCCACTCTTGCATTTCTAGGATGGGTATTGACACTTCTATTTTAAGTG11.0309278350515463No Hit
GGTTCGCTTCCGGGCCGATGGTGCCCGTCAGGGAGGTGACAAGCTCCTCG11.0309278350515463No Hit
GGGCGGTTCTCTGCGGAAATGGTGCCACCATGCACGTCGACAATCGCCTG11.0309278350515463No Hit
CACCGACACCGGCTTCTCGCCGAATTCTGCGACGATGGCCAGACCGTTAT11.0309278350515463No Hit
ATCCAGTATGGCTTTTGAGAATTTCAAAATCATTCTGATTCCTGGGCCTT11.0309278350515463No Hit
GACCAAACTGACGGGCGTAGGTCGCGAGCTGCGAACGCTCATTGGGTGCC11.0309278350515463No Hit
GGCCATAGGCCTGGTGCAGCAGGTCGCGGGTACGGCTTTCGAAGGCCGTA11.0309278350515463No Hit
ATCTTGGCTCACTGCAACTCTGCCTCCCGGGTTCAAGCAATTCTCCTGCC11.0309278350515463No Hit
TCCGATGATGGTGCCTCGTGAGTCTGCGGGCACTAGATCGGTCAGCGCAT11.0309278350515463No Hit
GGCCAGAAAATCAATCCCCATGGTTTCCGTCTCGGTGTGACGACCGATCA11.0309278350515463No Hit
AGCCACCATGCCCGGCCAGGAATGGTTTTTGATTGCCATGGAGAAGGCTG11.0309278350515463No Hit
GTCGAGGTAGGAGACCTGCGCCCCGATCCTGACCCCGCGGACGACCGCCT11.0309278350515463No Hit
ACCTTCGTGTTCGGCGGGCACATCCGGCGCGGCGAGCTCGTGGAGCTGCT11.0309278350515463No Hit
AACTAAAGCTTCAAGTACGTCAACGGGCACCCCGGCAACCCCATCAGCGG11.0309278350515463No Hit
ACGAAAGTGAATACACAAATGGTCCAATTGGAATGAAGAAAAGCGAGGTC11.0309278350515463No Hit
GGCTTCAACCTGATCGTGAGTCACATAGAGGGACGTGGTTTTCAGGCGGC11.0309278350515463No Hit
TTCTTCAAGCTGTCAGACAGTGGCTTCTCACACAGGACATGTTTGCCAGC11.0309278350515463No Hit
ATGTCCAACTGTGTCTGGCTCTACTATTTGTTGCGGCTCCGACATTCTCA11.0309278350515463No Hit
GACTGTCCACCCCGGCTGTCTACCGACGTTTCGACGAGTTGGGCGGCACC11.0309278350515463No Hit
GGCTGCCGCAGTACATTAAAGATCACCCGATCTACTACGCAGGCCCGGCA11.0309278350515463No Hit
TCACGGTCGCCCTGGATCACTTCCACCAGCTTGATCGCCTCCTGTTCCAT11.0309278350515463No Hit
TTCCGCGTCCATGAAGTTGTCCCGCTCGGTGTCGCGCTCGACGCGTTCGA11.0309278350515463No Hit
GTATTGAAGCGCGGAAACTGATCCTTCAGAACTGTCAGTTTATTCGTCCG11.0309278350515463No Hit
TCCTCGCCTCGGTCCGCAGGCTGCTCGACCTGCCCGCAGACACCGTCGTG11.0309278350515463No Hit
CGCCTAAAATCCCAATACTTTGCAAAGCTGAGGAGTTCGAGAACAGCCTG11.0309278350515463No Hit
GATACAGGTCGGCGCCGTGCTCGCGGGCGGCGGCCGCATGCGCCATGAAC11.0309278350515463No Hit
GTGGATGGCAGGCACCTCCTTGACTGGTTGATCCAATGTCTCAATGCTTA11.0309278350515463No Hit
TTCCTCGCGATGCATGTCGTTCGCGGAATCGAGGCTGCCGGACCTGGGTG11.0309278350515463No Hit
GGTCATGTATCCGCACAATCCTGAGCCTGCGTATTTCGGACGATCGGCCA11.0309278350515463No Hit
TTCATCGGTCGCTTCCACCAGTGCGGGGAGCTCCGGGTCGTTGTCGAGAG11.0309278350515463No Hit
AAGCTAACTCTAGTTTCACATGTTGAGGCATTTGATACTGTCCTGGGTCC11.0309278350515463No Hit
CATTCCACTTGGTTTGTTTCCATTACATTGAATTCCATTGCATTCCATTC11.0309278350515463No Hit
GCAGGAGTGAGGTTGGGCGGAACATCGACGCCGGTGAAGAAATCGCGCAC11.0309278350515463No Hit
CTCGTGGCGCTGCGGAACATAACCAATATGGCGCCATCCCTTTCCAGGAG11.0309278350515463No Hit
TGTGAAGGATCATGAAAAAGACTGTCATTGGGTGGAGGATCGCGCCTGGT11.0309278350515463No Hit
CCCCAATACTGAGATAATGCAAGGACAGCTAGCTTTAGATAACAATGGTT11.0309278350515463No Hit
TGGCATAGTCGATGATGCTTACCGATTTCACGCTTCCTTTACCCGTTGCG11.0309278350515463No Hit
CGACGGGCGCGCTTGCCACGCGCTGATCAATGCCCGTCATAGGCAAGGTG11.0309278350515463No Hit
GTATGGGTGTGTTACCTGGCTCTTTGTCCCTTTGTTGTATTTGTCTCTCC11.0309278350515463No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)