FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003668713

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003668713
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69
Sequences flagged as poor quality0
Sequence length146
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCATCATGGTCACCGGCATGGCGATCATAAACAGCGCGTTGGCGCGGGCG34.3478260869565215No Hit
GTTGAGCAGAATCTTGTCACCGTCGATCCTGGGGTTATTGAGGCGGCCCG34.3478260869565215No Hit
CCCTGTCTCCCCCACTCCTGGGTGACCACTTGCAGTGCCTGGCCCTGAAC22.898550724637681No Hit
CAGGTGCAGCGCATCGGCCGTGGACGCGACCGGCCCGTCGGGCCGGCTGC22.898550724637681No Hit
AACAAGACCATGCTGGAAGAGGAGGTCACACCGGACATCATCGCGGACGT22.898550724637681No Hit
CGGCAGCTGCGCGCGGAGAAGCTTAAGGTGCTTCGTGCCACCACCGCTGT22.898550724637681No Hit
GAGGAAAGGGAACGTGTGCCTGGGCTAGAAGATGACATGGCAACCGGACT22.898550724637681No Hit
GTTGAGGTCGATGACGGCAAGGTCGATGTCGTCCGACAGGCAGGCCAGCA22.898550724637681No Hit
AGTACATGGAGATCGTCGAGCTGGCTTAGCAATTCGCCATTGGGGCTTGG22.898550724637681No Hit
GTACCCGACTCAGTGGCCGAGGTGGCCGTTTCCGTGGCTGAGGTGGCCGC22.898550724637681No Hit
GCATAAATATGGTCTTTAAATGATCTTAAATGCAAACAAAACAAACCAAC22.898550724637681No Hit
GTATGGTGTACCGGGAACGTGTTTGGGTTTGGTTTGGTTGCCATTTTGCA11.4492753623188406No Hit
ACATGGAGATTAACTCAATCTAGAGGGTATTAATAATGAATCGTACTAAA11.4492753623188406No Hit
CGCTAGTCCTTATGGGTTTGTGCCGGGTGGCGACCCGGCCTGCTCTGGAC11.4492753623188406No Hit
CTCCGGGAAGGTCTCCCAGACGCCGACCTCGTGGACGTTTGCTTTACTGG11.4492753623188406No Hit
CCTCTAACTAGCTACCTAATTCCTTATCTCCGCTACCTTCCTGGTGCTTG11.4492753623188406No Hit
CCACCTGAAGAATAAAAAGGAGAGAGTTGTTGGAGACCATTAAGGCATAT11.4492753623188406No Hit
GAACAGCAGAAGGAATTCCAGGATCTCCAGCTATTTCCTCATAACTGTTG11.4492753623188406No Hit
GCATGTACGTGACATTCTTCAGTTGACGCTAGATGGAAGCAGAATGGCTG11.4492753623188406No Hit
CCTCATTATGAGGACGTGGGATGACGTGAGTTGATTTCACCTGGCCCACA11.4492753623188406No Hit
TGTCTTAGCTTCTTTTTTTATTTTATTTTTTTTTTTTGAGACGGAGTGTT11.4492753623188406No Hit
GACGGCGTCGGCGTCGCGCACGCCGCCGTCGGTGATGACACCGGCCGAGC11.4492753623188406No Hit
CATCCATACGCTCCGCCGGCCATCGATCGCAGGGGTCGCTCCAGATGATG11.4492753623188406No Hit
GCACTACGACGTGATTAGCGCCTTCATTAAATCTATACGCGGTTCCGATG11.4492753623188406No Hit
TCATAGCTCAGTGTAGCCTCCAACTCCTGGGCTCAAGCAATCCTCCCACT11.4492753623188406No Hit
CCTCTATGCTAAAAATGCCTAAAGTTTACTTTCTAGTCTCACTGGATTAA11.4492753623188406No Hit
TCACAGGCCGAGGCGGGCGCGCAGGCCCTCCCAGCGCGCGGCCAGGCCCC11.4492753623188406No Hit
CGAACCATGTGCTTGCCAAGGCCGACAATAATTTGGTGCATGTTCACCCC11.4492753623188406No Hit
GCTAGCAGAAGGCAAGAAATAGCTAAGATCAGAGCAGAACTGAAGGAGAT11.4492753623188406No Hit
TTCCTGGGTCGAGGAAATATCCGCAATACGGCAAGGAGCAACTCGAAATA11.4492753623188406No Hit
ACGTAATAAGAATCGTTCTTCTGGTATTTCATCAAATAATCCATCTTCAA11.4492753623188406No Hit
GTGTACAAGGCCCGGGAACGTATTCACCGCGCCGAGCTGATGCGCGATTA11.4492753623188406No Hit
GCGGTACTCCTCCGACCTGGCCGAACACCACGCCGTCCGCAAGAATGCCT11.4492753623188406No Hit
ATCCTGAACTATGTCATTATTATTGTCGGGGCGATGACGGTATTCGGCTC11.4492753623188406No Hit
CACGTAGTCAGAGTCACCACCTGAGCGTCGGTGGTAGCAAAGGTTGCTTC11.4492753623188406No Hit
GCTCGACACCACCGTCGACTTCTTCGTGAAGTTCCGCTACCTCGGCACCT11.4492753623188406No Hit
TCACAGAGCCACCAGTGGGTGCTTCAACGTGCGCATCCGGCAACCAGGTA11.4492753623188406No Hit
CCTTTTTACCAACCCCTTGTGGCTCAGCCTACAGGATTGCAGGTGTTTTT11.4492753623188406No Hit
GAACGTTTCCTGCGTCATGGGCCATTCTCCCTGGCATCTTGCGGGCTTGC11.4492753623188406No Hit
AATGTTAAGTTGTCCATTTTCCAAACACTGACCCCATGGTAATTTGGAAT11.4492753623188406No Hit
GTGTGGGGGAGGACCCCACATCTCTGGAGGCGAGGTCACGGTCATATCGC11.4492753623188406No Hit
GGAAAGAACCATCGGGTCTGGCTGGATGCTGGTGAAAATTGCAGGCGATG11.4492753623188406No Hit
ACCCACGACGGACATGCCGTATCTGCTGCGCCGTTTGGGTCGGTGTCCGT11.4492753623188406No Hit
CTCCTGAGGTGCGCAGGAAGAGGTCGACGTCGGGCACCTCCGGCTCGTCC11.4492753623188406No Hit
GCTCAAGACGGTGGAAGAACCGCCGGAGCGCACCGTAATTATCATGTGCG11.4492753623188406No Hit
ATCAGAAACTGCGGACTGCTGCGTGTTCATCGATCTCCCCTGCCTCACCG11.4492753623188406No Hit
GGGTAATTATGCTCTCTTCGATGGCGGCATCGACGCGGGCGATAACATCG11.4492753623188406No Hit
GAGCGGCGGGCATAAAGCCCGCCTTCGTCGCGCCGCCATTGCAGGCTCTG11.4492753623188406No Hit
CTCTAAGGTACCCCTATGGTCCTGACTCTGGTTGTTCATATCTTTATGTA11.4492753623188406No Hit
GCACCATATTATCCCAAGTTGGACGAGGAATCATTGTCGGTCTTGTTGTT11.4492753623188406No Hit
TCTCCACGCCGTACCCCGCCGCGAACGGCAGCGACTCCAGCAGCTCCCGG11.4492753623188406No Hit
ATGCTGGAGGGCGCCAGCCGCCCGGGCCATTTCCGTGGCGTCTCCACCAT11.4492753623188406No Hit
GTTTTCCCAGATGCCGGTGACGGCGTCGCGGTAGGTGGCTAGACCGGAGT11.4492753623188406No Hit
GTCCTGGGGGAGTTCAGTCAGGTGCCGCCGCACGGGGAACCAAGTTCCAC11.4492753623188406No Hit
TCATAATGTGCCTCTCGTCATGTGCATCGTTGCCGACGTCGTAGGTGTCA11.4492753623188406No Hit
AGGTAGCCGCGGAAGGCGTACTCCTCCCCGATCGCCTGCAGGGGCGTGGT11.4492753623188406No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)