FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003668743

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003668743
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20
Sequences flagged as poor quality0
Sequence length100
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGATTTGGCTGCCAAGCAAATCGCGGCAGTGGCTAAGCAGGCTGGCGACG315.0No Hit
CCGGTCTCCTCATGCAGCTGTCCGAGCGCCCGAAGAGCATCTTCCTCACC210.0No Hit
AACACCATCCGGTTGCTCAAACTTAGCGCGGACGTGCAGAAACGACTTCT15.0No Hit
CTCTAGAGTTACCCCATGGACACCACGACCACCATCGGTTGGGGAATCGC15.0No Hit
TACCTGCTCAGAGCAATATGACATACCTTTGGTGACATATGATGTGTTCA15.0No Hit
GATTGCCTTCCAGTCCATGGATTGTTCCATTCCATTCCATTAGATGATTC15.0No Hit
GCTGCGGCGAGCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCA15.0No Hit
AGTGGGAGGCCTACCAGAAACTGGCCGGGCTGATGTTGCAGAACCAGGAG15.0No Hit
ATGGGGATGATTGATGAAAAAAAAAGCGGCAGAGAAGATCTCCACCGCTT15.0No Hit
CTGCCACGATGTCCTCATGGTCGTCGACGAGGTGCAATGTGGCATGGGAC15.0No Hit
GTTCCATCCACGTCAATAACCGCTATGCCATGGGTCCCATGGGGCCGCTA15.0No Hit
GCGCGAACACATGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGC15.0No Hit
TTCCACCCGTACTACTCGGTGCACGATTTCCTCGGCGTGTGCGTCTTCCT15.0No Hit
CCCGAGCACCTTGAGCGGCTTGTCGCCGGAAGTCCTGGCATCGTGCACCG15.0No Hit
TGGCAGTACAGCCGCCGCGTGCAGATGCGCTGGCGTGCCATGCTGCCGGC15.0No Hit
GAGCGCATCCGCCGCCAGCTGGCGATCCCCACCGCCGAGAATGCCGGCTT15.0No Hit
GAGCAATCTTTCCTCGACGTGGAAACCGAAAAACTCTGCGACCTTGCCAA15.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)