FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003668883

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003668883
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54
Sequences flagged as poor quality0
Sequence length100
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACGGCTGCCCGTACATCGCCCAGCACCGCCGAGACGCCCGCCAGCGAG35.555555555555555No Hit
GTAGTTAGCCCACCACTTCAAGAACTCTGTAGCACCGCCTACATACCTCG23.7037037037037033No Hit
GACATCTACCTGCGCTGCCCGGACTGCGACGGCACGCGCTATCGCGCCGA23.7037037037037033No Hit
CGCATGATAGGCTCCTTGGCGTATCGATCAGGCGGCCTTTTCAGCGCTTG23.7037037037037033No Hit
TCCCATGGCCACGCCGGCTGCCCGTGCACCTCGCCTGTCAGCCCAAGCGT23.7037037037037033No Hit
GCATGAACCTGGGCTTCGGCGACGTCGAAGACCTGCTCGCCACGCTCGCC11.8518518518518516No Hit
TGCCCATTCCGCCCCATCGGCGACACCAGCCCAGCCGCTTCCATCTGTTC11.8518518518518516No Hit
ACAAGAAGTTCCCGGTGCCGCGCGCCCAGGCCGACCGATCGCCCGGCCAG11.8518518518518516No Hit
GTGAACACCTGGGTCTTCTCGTTGTGCTGGGCGATTCTGGTGTTTGCGTG11.8518518518518516No Hit
AACAACAAATGCTTCTATACGCGGTCTGTCGCTGCCGCGAAGAGGGAAAG11.8518518518518516No Hit
GTTATCGATCACGTGGGCGATGACCAACTCCGAGCCGAGCTTTTGTGCAA11.8518518518518516No Hit
GGCAGTAAACCGTCAGCACCAGGGAAATAATCGGGAATACAGAAAATGGC11.8518518518518516No Hit
TCTCAAGGGTCAGCCAGGCGGCCGGCAGCGTGGCGAGAGACAGGACTGTC11.8518518518518516No Hit
CGCTCAGACTTGCCCGCAGCGCTGGCGCGCATCCCGGCGGCCCGCCGCTA11.8518518518518516No Hit
GGCATGCGGCCGTCCATGTGCCGCGAGTAGTTCTCGATGCCCGAGCAGAA11.8518518518518516No Hit
AACCGGCGCGGAAGCCGGCGCACATGCCGGGCGAGAGCTGGGTGTCGCCT11.8518518518518516No Hit
ATCGTGCAGGAGGCACTCAACAACGTCGTGCGCCACGCCGATGCCACGCG11.8518518518518516No Hit
GAAGTCGGGCCTCGGCTGGTACCTGACCTGGGCGCAAGGCTGGGCATCGT11.8518518518518516No Hit
GGTCGACCGTGACGACGTGGTGCGGCGGGCCGTCCGCGAGGTGCCCAGAA11.8518518518518516No Hit
GGGGCGTGCCGCGCCGAACACCTTGACGACCCGCGCGAGGATCGTTTCGG11.8518518518518516No Hit
CCACGAATGTGGCCTGGAAGACGATCATCGTGACCAGTTCGCGCCCCTTG11.8518518518518516No Hit
GCTTGAGCGGGTTGGCGTCCTGCAGCGCTTCGGGCAGCAGTTCGGCCGGC11.8518518518518516No Hit
GTGCTGATGTCGCACTGAGCCTCGACCTCAATTGAACCTGAGGAGATCAC11.8518518518518516No Hit
ATGCTGCGCGGTGCTGGTATCGGCACGCCACTTTGACGCATCGCTAAGGT11.8518518518518516No Hit
GACCCGGAAAACCTCGTCGGCGAAATCGCGGATTTAATGACACATCTGAA11.8518518518518516No Hit
GTACACCGCGATGTGCTGCGAATTCGGCGACCAGGCGACGCTTTCAAGAT11.8518518518518516No Hit
ATCATCGACAGCTCGAGCTGGTTCATGAAGGCCAGGCGGTTGGGCAGGCC11.8518518518518516No Hit
GTGGAAGGCGACCCCGTGGCTCTCGTACTTCGTGAAGCGCGTGAGACCGA11.8518518518518516No Hit
GCCCGACTTCACACCCATCATCTCCGCCGTCACCAGCACCGTGAACGATG11.8518518518518516No Hit
GGCAGCGTGCGCTCGTTTTCCCGCTTCGGGCTCTCGGTTGTGACCATCGT11.8518518518518516No Hit
CAGCGATACCGTGGTCGCCGCATCCAGCGGTGCATGCCCCAAGGCAATGA11.8518518518518516No Hit
GGTCGTCGCCGATGCGGATCGACGTCACGAACAGGGTGTCCAGCCCGGGG11.8518518518518516No Hit
GGTCACGGTGGTGAATCAAAAAGGGTATCGGGTCTGTCTCTTATACACAT11.8518518518518516No Hit
CCTTTCAGACGCAACTGTCGGCAGTCGGCTCGCTCAAAAGCGCGCTGTCG11.8518518518518516No Hit
GCAGCGACCCGAGGCTCATGTCGATGTTCGGGGCGTCCCAGACGAGCAGC11.8518518518518516No Hit
CTCGCTGGCGGTGGCCGAGAAGCGCCCGGGCTTTTTGCGCTGGAGCCTGC11.8518518518518516No Hit
GTGCTGGACCATGGCGCCAACCGCCGTCATCCGCAGGACGTGTCTGCCGA11.8518518518518516No Hit
CTCACGCACCGTGCGTCAGGCCAGCACATTCACGTACACGTGCTGCGCAA11.8518518518518516No Hit
GCCTCTACGCGCCGCAGGGTTTCCGCGCGGTCGGCATGTATTACGCCGAC11.8518518518518516No Hit
CCTGCGGTGTGTCTTGCTGACGGCGCACCTGCTCGGCGACAAAGGATTGC11.8518518518518516No Hit
GGCCATGGTGATCGTGATTGCCGGCATATCGGGCTACATCGGGGTGCGCA11.8518518518518516No Hit
GAAGTCGGGCCTCGGCTGGTACCTGACCTGGGCGCAAGGCTGGGCCTCGT11.8518518518518516No Hit
GGGCCACCAGCGCCAGCAGGTGACCATCCTGCTGCACAAGCCCATGGGCT11.8518518518518516No Hit
CCCACCACGTGATACGGCCGCGCCAGCCCTGGCCGCCTTGAAGGCCAGCG11.8518518518518516No Hit
GTGTTGCAGTCCGTGGAGTCGCCGGCGCGCTTGCTCAAGCCATTGACCAG11.8518518518518516No Hit
GCGCGAGGCAGCGCTCGCGATGCTTGGGCGCCGGGACAACAAGAACAAGC11.8518518518518516No Hit
TTTCTGCGGGCATCAGCAGGGCAAACGCGTTATCGCTGTTGATCGCGTTT11.8518518518518516No Hit
GCGCCCGGCGGCCAGCTCGTGCAGGAAACGGACCACACCGCCGCCGTGCG11.8518518518518516No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)