FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003668884

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003668884
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54
Sequences flagged as poor quality0
Sequence length100
%GC62

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCTTGCGCTGGGCGGAGGCTGGCGTGGCGCGAGCATTGAAACCCCAGTG35.555555555555555No Hit
GCATTGGCCGGCACATCCTGCTTGACGCGCTTGCGCGCCGCGGCCTGGGC23.7037037037037033No Hit
GGCCGCAGGCGGCGCCTCGCGTTCCAGCACGGCTACCATTTCAGCGTCCC23.7037037037037033No Hit
ACGCAATGCAACAACCCGCCGATATGGCCTGCAACGTGGCGTGCGCCGTC23.7037037037037033No Hit
CCAGTGACGCTGCGCTCGCTGGCGTCGACCGGATCGACGACATAGACCTC23.7037037037037033No Hit
CTGCCTTACCCACGCCATCGCGGCGACCCGCGTTTGAGCGCGTTGCGGCA23.7037037037037033No Hit
GTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAAC23.7037037037037033No Hit
CTCCAGATGTCAACCCCGTCCACCACCGCGCGGCCGCCATCCGGGCGCAG11.8518518518518516No Hit
AAGCTCAGCAGCGCCAGCAGCAGGCTCCAGCGCAAAAAGCCCGGGCGCTT11.8518518518518516No Hit
GGCCGGGATCGGCCGCAGCGCAGTGCGCCCAGTGGCTGCAAGGGTGGTTG11.8518518518518516No Hit
CTTACACCGTTGTATGAATACCGCGCGCATTCAGCGCACGCGCCACCTGA11.8518518518518516No Hit
ACGTTCGACCTCGAGATGATGCAGCAGCTCGGCTTCTGCTCGGGCATCGA11.8518518518518516No Hit
AATCTGGCTTTCGGCTTCGCGCAGGCGCTCGGCCACCTGCTGGCGCGCCC11.8518518518518516No Hit
TCGACGACCTGATCGTCCCGAACGGCTTGGCCTTCAGCCCCGATGGCAAG11.8518518518518516No Hit
GCCAAGTCCGGCGCATTGCCCACACCGTTCTTTGCGCCGCCGCAGGCATT11.8518518518518516No Hit
ATCGTTGCCTGCCCGCCCAGTAGCCGGGCGCGCTCGCGAATGCCAAGCAA11.8518518518518516No Hit
ACAGGATTCTGGTAGCGGTGGATGGCAGTCCGACGGCAGACCGGGCGCTG11.8518518518518516No Hit
ACGCCACGCCGCGGCGCTCGCCCGATGGTGCGTGGGAGGTGGTGGCCGAT11.8518518518518516No Hit
ATTCAGATGTGTCATTAAATCCGCGATTTCGCCGACGAGGTTTTCCGGGT11.8518518518518516No Hit
GCTGACCGGCCTGCCCAACCGCCTGGCCTTCATGAACCAGCTCGAGCTGT11.8518518518518516No Hit
GTGTCATGGATTAAAACCCACCGATTGAAGAGATGGTCCATCGCTTCCTT11.8518518518518516No Hit
CATCCTGACCGGAGCCGGAACGTCGGCATTTATCGGTGACATCATCGCGC11.8518518518518516No Hit
GCTTTGTGCCGCTGCCGGCAGCCTACTGGCCCTGCCTAGCTGCGATCGTC11.8518518518518516No Hit
GTGCAATACCTGCCGAGTACGCGCTACACGATGTCGTACATCCTGATCGA11.8518518518518516No Hit
GACTGGTACTGCAACTGCGAATGATTTCGAAAGGGGCTTATTACTGGTAT11.8518518518518516No Hit
GTTCGCTGCTGCCGATTCTGGAACGCAAGGCGGGGCGCATTCTGGCCAAT11.8518518518518516No Hit
GAATATGACGAAGCCATCCTCGCCGGTGATCCGGGTGAAGCTGCCGCGAG11.8518518518518516No Hit
CACATAGCCCATGGGCTTGTGCAGCAGGATGGTCACCTGCTGGCGCTGGT11.8518518518518516No Hit
CTGGTGTTTGCCAGCGTGCACAACAGATTGCAGCGGCGCGCCGCACGGCG11.8518518518518516No Hit
GCGTAGCGCGGGCCACAACGTCTCGTACACAGACCGATGGCCGTCATCCA11.8518518518518516No Hit
TTCCTTGCGTGCGCGGGCGTAGCGTGCCAGCAGGCGCTCGTCGCCGAGGC11.8518518518518516No Hit
CCCGACGGCATCCGCACTGGCGCGTTCGATTGTGCAAGCCACGGATTTCG11.8518518518518516No Hit
GATTTGGTACGAGCCAGCCGGCGCCGTATTGGACAGTGAAGCCGAGAGGA11.8518518518518516No Hit
AGCTTGGCCTGACCGATGAGCTTGGTCTTGGCCAGACCCCCCACCGTCTT11.8518518518518516No Hit
GCATAGACGATGCCGCCCTGGCGGATGATGGTCATCCAGTCGAAGATGGG11.8518518518518516No Hit
AGCTCGGCGTCTCGCAGCAGAATCTGCTGTACTACGCCAGCCTGGCGAAC11.8518518518518516No Hit
ATGTATTCGGCCTGAACAACTTCGGCGTCAACCTGACCCGCCTTGCGCCG11.8518518518518516No Hit
GTTAGAGTCGGGCCCGTGTCGCCGTCCCCCTCGCCCGCCGACCTGGCCAC11.8518518518518516No Hit
GTGCATCGACAATGGCCGCCTTCTGCGCGGGCGAAACCTTGGCGAAGATC11.8518518518518516No Hit
GTCCACAAGCGCAAGGACAAGTTGGCGGAATTTGACAGCCGGCATTTGAG11.8518518518518516No Hit
GATGCGGTCTGAGGCCAGGCGGGTCTCGCCGGTTTCAATGGGCAGGCCGG11.8518518518518516No Hit
TCCTGTCTCTCGCCACGCTGCCGGCCGCCTGGCTGACCCTTGAGACTGTC11.8518518518518516No Hit
GCACCGATGCATTCCAATGCAACGCGCTGCTGATCGCCTGCGCAATCTCG11.8518518518518516No Hit
GGGGCCATCCGCGTCAATGGGCAAGGCACGCCCTGTGAGTACGCAGTCTG11.8518518518518516No Hit
ACCCGATACCCTTTTTGATTCACCACCGTGACCCTGTCTCTTATACACAT11.8518518518518516No Hit
GCGGACATCGTCGCAACAGGCGGAGTCGCGGCTTTTAAGGGTGAGCAGTT11.8518518518518516No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)