FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003669238

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003669238
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20
Sequences flagged as poor quality0
Sequence length100
%GC58

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGCGCTTCAAAAGCACTACACCACGTCGGTCAGGGCACACCTGCTGCC210.0No Hit
GCTCCACACCGGCCATGTGGCGGACCGCTTCGATCGGCGCCGGGTCGCCG15.0No Hit
ATCTTTTTATACATTCAGACTTCACTCCTCATAGAGGTCTGAATCTACTT15.0No Hit
AGCAGGCGCAGGGCTGATTGCCCACGCCAGTTCCGGCCAACAGAAAGGCC15.0No Hit
TTAAAGCGGTGTTGCTGCGTTCGATTGAGCAGGGTGGTACAACGCTGAAA15.0No Hit
GGCCAGTGACACCACCAGCGCGGCGGTGGGTTCGGTCATCCCGTGGCAAT15.0No Hit
TCCCTGAAGGCAGCGGCAGGCGATGTGATCAGCATCATCGGCTCCAGTGG15.0No Hit
GTGGTTGTGCTGGGCCGCACCGTGGCCAAAGCACTATTTGGTCGCAATGA15.0No Hit
GGTCTTCCGTCGGTGCCACGGTGAGCGATTCAATGTTGTAGCCGCGTGCC15.0No Hit
GATAAACGCTGCATCCAGTGATGAAAAGTTTCAGCAGACTGTTTTTTGAG15.0No Hit
TGCACAACCCATCCAACTCAAGCTCGTGGCTTGGTGATGCGGAAGCAGCC15.0No Hit
ATGCCCGGTTGTTTGCGCTGCACGACCATAACGAACAACAAAAAGCTGAA15.0No Hit
ATCTTCAGCTTGCGTGCGGCTTCGTTGATCAGCTCCTGCAGCGCGCCGAA15.0No Hit
GCCGGCGTTCATCTCTGAACGCCTGCTGTCACGGCGGTTTGTAATCCGTT15.0No Hit
GAATGAGGGCCAGCACGCCCCATGTCGTAATCCGGGCCGACCAGCGTCGG15.0No Hit
GTGCCCTGCAGCGTTTTGGCCATTAAGGTCGAAGCGCAGCAATGAAAAAA15.0No Hit
GGAAAGGGATGTGACCGGCGAGGTCACACGCCTGCGTGCCCAGCTCGAAC15.0No Hit
CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGG15.0No Hit
GAGCAACTGCTGGAATCCGCGCGTCGCGAAGCGGAAGAAGAGTTGGGCAT15.0No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)