FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003669239

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003669239
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22
Sequences flagged as poor quality0
Sequence length100
%GC66

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGCTGACGGCGGCCTGGCGGCGAGGGCCAGCCTGCAGGCGCTGGCGCTG313.636363636363635No Hit
GATGTCCTTCTCGGTCATCACGTTCAGGGTCCAGCCGGTGAGCTGGCTTG29.090909090909092No Hit
ACCCGAGATCACCGCCTCGATCTGCGCGCCGGTCAGGACCTCGTCATCCA29.090909090909092No Hit
GGTCACCAGCAATGTGCCCACCCCACCGAGCACCACCGCCGGCACTGTGC29.090909090909092No Hit
AACCTGCGCAACACCCAGGCCAAGGCGCAAGCGGCTGGCGATCAGACCAG14.545454545454546No Hit
GACAAGGCGTCGTCGATCTCGCAGCGCTGCGGGGCGAGGCCTTCCTGCTT14.545454545454546No Hit
GTCTGGTGCAGCGCCTGCACGAAGATGGCTGGAACATCATCGCTACCGTG14.545454545454546No Hit
GTCATGGCTGATTCGCTTTTTGCAAGAAGCGCGTCCAGCCATCTTGGCAG14.545454545454546No Hit
CCCCTGCGCCGACGCCGCGTCGCGGATCGGGACGGCTTCGGCCTTTCCGC14.545454545454546No Hit
GGTCGGGATCAGCCGTCTCGGGCATGAAGTTCTGGCCGATGCCTTCGACC14.545454545454546No Hit
GTACCTCGCGCGGACGGCACGCGACGACCGTCTGCTGGTCGTCGTCTGCT14.545454545454546No Hit
CCTTGAGTCTGGCCGCCGCGCCCGGCGCGGTGCGCGCCCAGAACGCCGGC14.545454545454546No Hit
ATAATCCGGCGAACCTCAAACTGATTGGCGCGCTGCTCGAAGAACTGGTG14.545454545454546No Hit
ACTATGGCGTGGACCTACCCATCGGGGTTCTGCAGCTTGAAATCGGTCGC14.545454545454546No Hit
TGCTTGCTCGTTATACTGAACATCCAGAGCTTAAGCACCCACGCATTGCA14.545454545454546No Hit
CGCCGGGTTCAGCGGCAGCGCCAGGTAATAGCGCCCCACTTTGCCGAACA14.545454545454546No Hit
GGACAACACACAGAACCTGATCTGGATCGATCTGGAAATGACCGGTCTGG14.545454545454546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)