FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003669240

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003669240
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22
Sequences flagged as poor quality0
Sequence length100
%GC66

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGCGCGCAGCCAACGGTTTTGCGCCAACAGCAGGCGATCGAGCGCTTGC313.636363636363635No Hit
GGCCTCATCGAGGTCATGGCCGCTTCCCGTGATCCGGGTTCGCGCGCCAA29.090909090909092No Hit
TCCTGGTGATGATCGTCGCCCTCAACCGCCGCATTTCGGCGATCCAGCGG29.090909090909092No Hit
GGCTGGCGCGCTTCCCGTTCGAGCGCAAGGTCGGCCGGACCATGTTCACC29.090909090909092No Hit
GTTCGTGTTGACCTCCGCCGATCCCGACGACCTGACCCTGCGACAGGCGC14.545454545454546No Hit
TCTTCGAGCAGATGGAGGGTCAGGTCGACGCCTTCGTCGCCGGCATCGGT14.545454545454546No Hit
CCACGGGTGGACAGGCCGGCCACCACGTCGGGCGCGTAGAACACGCGCAC14.545454545454546No Hit
GCCAAGGATCGAGCTCATGAAGGCCAGCACGCCACTGCCTTCGCGCAACT14.545454545454546No Hit
GGATTCGTCGATCGGTTTCGCCAGATAATCGTCCATACCGAGTTTCAGCA14.545454545454546No Hit
TCGCTGTGGTGGATGGCGATCACCGGGCCTTCGGCCAAGGTATTGAGGTT14.545454545454546No Hit
GGTCTGTTCGCCGCCAGCAAGGACGTCAGCCTGGCCGAGTTTCGGGCCTT14.545454545454546No Hit
TACAAATATCTCAGCCGCATTGAACGTCTCAAGCAAAATTCACCCAACGG14.545454545454546No Hit
GGCGACAAGGGCGCTGTCACGCCGGCCAGCGTGGCGTATTTTTTCACCAG14.545454545454546No Hit
GGCGGTACTCCCCGACGTGGCGGACGAACAGAGTGGCGCGGCTCTCCAGG14.545454545454546No Hit
GAAGACAACTGGCAGGTCACCGACCGGCTGCTGCTCAATATTGGCCTGCG14.545454545454546No Hit
GTTCACGCCCACGCTCGACGGCAAGGCGCTGTTCACGGTCGAAGACCTGG14.545454545454546No Hit
GGGTTGCCCGCCGTCGCGTCGTACACCGCGGCCAGTTCGCCGTCGCTGAC14.545454545454546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)