FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003669383

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003669383
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length100
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAAAGATGTTTTCGATAATCATCGTCCCGCCAATCAGTTCGCCGATGT316.666666666666664No Hit
CCGCTCATCGCATTTCTCCAGTTTTGGATCCGGCAAAGCGCCGGTGTTCG15.555555555555555No Hit
GTTTTGGACTTGGTGGTCCATCCCCCTTTCGTTCCCTGCCGGGACCTACT15.555555555555555No Hit
GCTCGCTGGCCAACGCCAAGTCGATCCCCATCGCGCAGGCGATTCAAGCG15.555555555555555No Hit
AGCAACTGTCGCGCCAGTACGCAATGGCAATGCATCGCGTGACACGGCGA15.555555555555555No Hit
GTACGCGACTGGGCGTGGAGCATCTGGTCGCATTGGGTCACCAGCAAATC15.555555555555555No Hit
GGGCAATACCGCCGCCGTCGCCGCAGCTGTCACCGATGCGGCCATGCCGA15.555555555555555No Hit
TTACCCGGCTCGCACCTGGCTCGACTATATGCAGACGGCGATGAGGGGGA15.555555555555555No Hit
TCGCGGAGAAGAGCATAGACGAGGACTCCGACGGCGAATCTGGTGAAAGC15.555555555555555No Hit
TTATTTGATGGATGCGATCAAACAGGAGAGTGCGATGTCACGCGAACTCG15.555555555555555No Hit
GATGTGACCCGGCATGATGCCGATCTTGATTTCGTCCGGCGTGATCAGGC15.555555555555555No Hit
ATCCCGCCTGCTACATTGTTTTCGCGCGACAACTGTTCTGGAGACTTGTC15.555555555555555No Hit
GACAAAGTCGTGCGACATGATCTCGCCGGAAAGCGAGCCCTTGCCAGGAA15.555555555555555No Hit
GGTGTCGGCCTACCCGGCCGGCATGTGGGCGCTGATGCAGCAGCTCTGCC15.555555555555555No Hit
ATCCATCATCTGCTGGTTGCGCGGGAAGATGTGCACTGTCCCCTTTCCGG15.555555555555555No Hit
CAGCAACGCCACGCGCATCAGCACGGCGTAGCTGTCGCGGCGGACGATGC15.555555555555555No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)