FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003669806

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003669806
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4653
Sequences flagged as poor quality0
Sequence length100
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT481.0315925209542232No Hit
GTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA280.6017623038899635No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT230.49430474962389853No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG210.4513217279174726No Hit
TATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA200.4298302170642596No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG200.4298302170642596No Hit
GTATCAACGCAGAGTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAA190.4083387062110466No Hit
GTACATGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAA170.3653556845046207No Hit
ACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAA150.3223726627981947No Hit
TATCAACGCAGAGTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAA150.3223726627981947No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAA150.3223726627981947No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT150.3223726627981947No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG150.3223726627981947No Hit
GTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAA130.2793896410917688No Hit
ATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAA120.2578981302385558No Hit
GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA110.2364066193853428No Hit
ACGCAGAGTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAA110.2364066193853428No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA110.2364066193853428No Hit
GTATCAACGCAGAGTACATGGGCAGTGGTATCAACGCAAAAAAAAAAAAA100.2149151085321298No Hit
GTACATGGGACGGTGGCTCAAGCCTGTAATCCCAGCACTTTGGGAGGCCA100.2149151085321298No Hit
CTCTATAGCTTTAATTGAGATGTAGGCTGGGTAGCCAAATCCTATCAGGT90.19342359767891684No Hit
ATCAACGCAGAGTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAAA90.19342359767891684No Hit
GAGTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAA90.19342359767891684No Hit
TATCAACGCAGAGTACATGGGCAGTGGTATCAACGCAAAAAAAAAAAAAA80.17193208682570385No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA70.1504405759724909No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA70.1504405759724909No Hit
GGTATCAACGCAGAGTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAA70.1504405759724909No Hit
TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAA70.1504405759724909No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGT70.1504405759724909No Hit
GTACATGGGAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAA60.1289490651192779No Hit
GGTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAA60.1289490651192779No Hit
GGCTGAAGTGCGGTGACGTGATCTCGACTCACTGCAAGCTCCGCCTCCCG60.1289490651192779No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGG60.1289490651192779No Hit
GTACATGGGACTTCGCGTAGCAGGCAGGGAACTGGCCGCGGCGAGCGGGA60.1289490651192779No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGT60.1289490651192779No Hit
ACGCAGAGTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAA60.1289490651192779No Hit
ATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAA60.1289490651192779No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGG50.1074575542660649No Hit
GTACATGGGTAGTCCCAGCTATTCAGGAGGCTGAGACAGGATTACAGGCG50.1074575542660649No Hit
GTCTCGAACAACAACAACAACCAAAAAAAGAAACAAAAATTAGCCGGGCG50.1074575542660649No Hit
TATCAACGCAGAGTACATGGGACGGTGGCTCAAGCCTGTAATCCCAGCAC50.1074575542660649No Hit
GTTTTGGGGGGGCTTAACTACCTGTTCAACTCTGACTGAATCATCGACAA50.1074575542660649No Hit
CAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAA50.1074575542660649No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA50.1074575542660649No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG50.1074575542660649No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG50.1074575542660649No Hit
TTCCTTTCTTCTCCACTGTTTTCTCCTTCTTTTTCTTCTCGACTTTCTGG50.1074575542660649No Hit
CCCCTACAATCAGCATCATTCAGCCCCGCTCCTCCTCCCCAAGCCAGCCT50.1074575542660649No Hit
GTCTACAGCTGCTCGGGGGCGGTTTCTTGGCGGAGGCTTGGCCGGCTCCT50.1074575542660649No Hit
GTTCAAGACCAACCTGGCCAACATGATGAAACCCATCTCTACTAAAAGTA50.1074575542660649No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)