FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003669866

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003669866
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17
Sequences flagged as poor quality0
Sequence length100
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATGCCTTCCGACTTCTTCTGAATGTCGTAAGCGAGACGACGCTTGCCCC211.76470588235294No Hit
GAGTCAAGGAAAACCAGGAGGTATGTGGTGCCATGGAAAACTGGCCAGGC211.76470588235294No Hit
TGCTGGATGCGGAATCAAGGCCTCCGGTCCGAACTCATACGGCCCAGGCT211.76470588235294No Hit
CAGCACCGCCTCTTCATGGCGAGTGTCGTCCGAGGCGGTGCCCACGAGCG15.88235294117647No Hit
GTGATCCACTCGGTGACCTTGGTGAAGTTCCCGTTCAGGGTGAACTTCTC15.88235294117647No Hit
CCGATGCCTTCGATCCTGGAACTAAGACCCGATCCTTCGTCGTTACTTGG15.88235294117647No Hit
GCCTGATCTGGCTCGCGACCGCCGTCACCTCGCGCTATTCGTCGCTGTCG15.88235294117647No Hit
CATTAAGACACAGCCTGTATTCGTTAGATTTTGCTACATGACAAACTACC15.88235294117647No Hit
GGGTGTGGCGGATGCGGCCGCTGCGGGGGCGCCGGCCACCGGCAGCATCG15.88235294117647No Hit
GAACAGCTCCGGCACGATGCCCTCGACCCCCTCGAGCGTGTCGGCCAGCG15.88235294117647No Hit
AGGATGTCCTGGTCCCTCGCGTTGAGAATCTTGTCGAGGAGGAGGTGTGG15.88235294117647No Hit
TCATGGTGCCGCAGCGCGACCTGCCGGTGCGCGCGGCCAAGGTGGCCGAG15.88235294117647No Hit
GCCCATGGGAGGCCTCACCGTCGTCAATGAGGTCCTGGGCGATCCGCTGG15.88235294117647No Hit
GTTGATGTCAGGTAGGTCCTCGATCACCTGACGCTGGAATTCGGTAAACT15.88235294117647No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)