FastQCFastQC Report
Tue 10 May 2022
EGAF00003669953

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003669953
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences499359
Sequences flagged as poor quality0
Sequence length100
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTATAAGCATATCAATATTAAAAAGCAAGCAAGCAGAATTTGGAATTC7680.15379716796933668No Hit
GTACATGGGATTCCTGAAGCTGACAGCATTCGGGCCGAGATGTCTCGCTC6380.1277637931828604No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)