FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003669960

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003669960
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences89
Sequences flagged as poor quality0
Sequence length100
%GC61

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTATGACGAGGCCAAGGACTACCGGTTCAACCCGTTCGACATCACCAAGG33.3707865168539324No Hit
CGCATGTGGAGCGGCATCTGGCCGCCCTCGAAGCCGTTGATCGCGACGCC22.247191011235955No Hit
GCTCGGGGTCGTCGTGGCTGCGCAGCGCGACCAGCGTGCTGACGAGCGCG22.247191011235955No Hit
GAAGCTCACGATGTCGCCGGACAGGGGCAAGGCGATATGCAGCAGGCCCA22.247191011235955No Hit
CCCGACGACGGGGCATTCGGCCCCGTGGGGCGGCGCGTCGCGGCGCCGGG22.247191011235955No Hit
ACCACGTTCCGCAACTTCAGCGAGATGCTGGCGCACAGCGACGAGAACCC22.247191011235955No Hit
TCTCTATACCCACGTGCTCCACGCTCTTGAGCCCGCCTCCGTCGAACTCG22.247191011235955No Hit
GTTAGCGGGGGGGCGGAGCAAAGTCAAGTGCGCCCGTCGCTTGTGCACTG22.247191011235955No Hit
GTCATAAGGGCACTGTCGCGCGGCGAGGCCCAGTGGTGTGAACACAGATG22.247191011235955No Hit
ATCCTCGAGGTCGCGAAACTACCGGAACCGACCTTTGTCAACGGCGTCCA22.247191011235955No Hit
CTCTCCGCTCGCGCATCTGGGGTCGTCACCGCGAAAACTGCCATTCCCAG22.247191011235955No Hit
GTAGGCCGGTGGCGGAACCTCCTGGGCATGGGCGGCGCAGGCGAACAGGC11.1235955056179776No Hit
GTCCCCACCACTGATTCCGTTACCGGCGAACCGCTGCCGCTAGACCCGGA11.1235955056179776No Hit
CTCGGACGCTCCATCAGATCGGGCCAAGCCTTGTTGTCGACGGGCGTCTG11.1235955056179776No Hit
CATCGGGATGCGGGGCGTCTGCACGATCCACGCGCCGTCGTCGGTCACGG11.1235955056179776No Hit
GGTCTTCGATCGAGTCGTTACGCAAGGACCGACGTTGTAGACATAGCGCA11.1235955056179776No Hit
GGGTGTAACCAATATGCACCAAGAAGTTTTGCCAAGTTATTGGAAACAAG11.1235955056179776No Hit
CCGACGCGCAGGCCTCGTGGTGGGGCGGCCGCGGCATCGGCACGGTTCCG11.1235955056179776No Hit
ATGCTGCGGCTTCGAGCAAAAGGCTCTCGCGGCGGAGTCGGCTGAGCTGC11.1235955056179776No Hit
GCCGTGCGCGAGGTCATGGCGCTGGCCGACCGCGTCAACGCCTACGTGGA11.1235955056179776No Hit
GTCACCACCCCGCTGATGCGGCTCCAAGACCCCGACCACACCAAGATCTG11.1235955056179776No Hit
CCTGCACGGCGCGCGCGCCCGACTCGGCGGCGGCCCGGGCCTGCCGCGCC11.1235955056179776No Hit
GGCAGGCATACAACATTTCAATAGGTTCATTCCAACTGGCGAATTTTTGA11.1235955056179776No Hit
CGGCTTCTCCGGAGCCGCCTGAGCTTCATCACTGCCACAAGAGTGTTGAT11.1235955056179776No Hit
GTATAGGCCGGGTGCGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAG11.1235955056179776No Hit
ATTCTACCCTTTCCCCTCTCCTGGTGGCAGCGCTGGTGGTGGCTGGTAGT11.1235955056179776No Hit
GCTGTGGGGGAAGCACATTTATCCCGATCTGCAGCGCATGGAGACTTATC11.1235955056179776No Hit
CTGCACCGAAGACGGCGGTCCGATGCGCACGGGCTCGCCGCGCTTCAACT11.1235955056179776No Hit
CCTTCATGCTCGCAAGGGAGTCTCGTGAGAGCGCGGCGCCGCGCCGGTCT11.1235955056179776No Hit
CTGGTGGCTACGCGACCGGGAACACTCCTACTCTCAAAGCTGGTGGGGCT11.1235955056179776No Hit
GACATGTGGAAGGTGACTTTTGCCGTCGCCTCTGCGACGTTGCTTGCTGA11.1235955056179776No Hit
GACTGACACCTTACATGCCCAGGTACCCATCTGAGACGAAGCTTCCAGAG11.1235955056179776No Hit
ATACAGAGAAGTGCTTTAAAGGAGCTGATGGAGCTGAAAGCCAAGGCTCA11.1235955056179776No Hit
GTCGTCGGTATCGACCGACACCTCGCGCGCGTAGTCGACGTGCTCGGACA11.1235955056179776No Hit
GTCTTTTCCTCCGCTCCTTGTCTCTTCCTCCGCAGGGGCGAGTTCAGCCG11.1235955056179776No Hit
CGTAGTTGCCATGCTGTCCGGAAAAATTGTCATGCAGGGCAGTGCCTCGG11.1235955056179776No Hit
TCTCGCGCTTCGCGGCCATGCTGCAGGAGCGGCACCCGGGCATCGTGCCG11.1235955056179776No Hit
ACCCCGGTCCATTTGCCCGCCCACGCCGCATAGCGATGCGTAGCGGCGGC11.1235955056179776No Hit
GCTCCGGGGGCGGGATGAATGCGGCCTCGGCGTTCGCGGGCACGATCTGG11.1235955056179776No Hit
ACCAACACCGTGCGCCAGCTGCGCGATCCGCGCGCTTTCCTCGGCCCGGC11.1235955056179776No Hit
GTACATGAACACAGTTCGCTCTAGGCTGGGAGTTTGCATTGTGTGAAAGC11.1235955056179776No Hit
ACAAGGACTGGCGCGGAGGCCGCGGCATCCTGGAAAACATCATCCCGTCG11.1235955056179776No Hit
ACCTGGGACCAGGCCCTGGAGGCCGTGCCCGTCGAGCTGCGGCCGTGGTT11.1235955056179776No Hit
GCTGTGCACAGGTCACAGTGGGGTGGAGCCTTCCAGGGGTGGAACATGTA11.1235955056179776No Hit
GTCTAGGACCGAAACCGACTCCCCTTCCCAAACGAACTCGCCATAGCACT11.1235955056179776No Hit
GAACACGACCTCATCCCGGAGGAAAGGCTGGACGAGATCATGTCGACCCA11.1235955056179776No Hit
GATGAAGGCAAGGGCCGCCCATGGGCCGCACTCGGCTGCGAGGTGGCCAT11.1235955056179776No Hit
GTCTTCATCACCCCGCGCATGGTGACCGATGCGATTGCCCGCAACTGACA11.1235955056179776No Hit
CATCCAGTCGATGCGCGCCGTCTCGAGGTAGCGGAAGTAGGTGCCGTTGT11.1235955056179776No Hit
ACTGTCAATTGGTGAGCTCAAGAGGCGGGGTGACTGTTCCCCGACCTCGC11.1235955056179776No Hit
CCCAGAGGCAGGCGTCGGCGGAGAGCAACTCCTTGTTGGCGCGGACGAAG11.1235955056179776No Hit
TAGCTGATCTGCGCCTCGGGCAGCGCCAGCGCCACGCCCTTGGCGTAGGC11.1235955056179776No Hit
GCGGAGCACGTCTTGCCGCACGCGGATGCCGCGGGCCTCGAGCTGCTCTG11.1235955056179776No Hit
GTCTGCGTGTGTGAAGTTTTCAACTGGTTCCCACGATGTTTCTGTATCGG11.1235955056179776No Hit
CAGTTATCGATGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGT11.1235955056179776No Hit
GCGTCAGGGGACGCCGTAAGCGCGCCGTTTGACCGCTTATCCATCATTCG11.1235955056179776No Hit
AACCCACACAGCGGGGCATTTTGGCAGATCTCACTTGCGACAGTGATGGC11.1235955056179776No Hit
AGGTAGGGTAATACCTACTGGAGGCTCGAACCCACGCACGTTGAAAAGTG11.1235955056179776No Hit
CCCTCATGGTGGTACTGGCGATCCTGGCCGGGCTGGGCTGGGGAGGCTAC11.1235955056179776No Hit
GCTGGCATTGAGTAGTGATGGGGCTACAAAAGAAATCATCTTGATGCGTG11.1235955056179776No Hit
CTCTTAGAGGAGGTAGGAAGTTGAAGAAGTTGATGATGTTGGCGGCGCTG11.1235955056179776No Hit
CATTTCATGAGTAATGACAGGTTTTCCTTTTTTATCTAAAACACTGAGTG11.1235955056179776No Hit
GGGCTCAAGTGATCCCCCCGCCTCCGCCCATCATCACACCCATCTACCGT11.1235955056179776No Hit
CTCAGGCCCAGGGCGTCGAGCGACTCCTCGGTGGTGATCAGGGCCACGAA11.1235955056179776No Hit
GATTATTCCATTCGAGTCCATTCGATGATTCCATTCCATTCCATTCGATG11.1235955056179776No Hit
ATTTGAAGCGGCGGTTGAACAGCACGATGCGCTGATCGCGGTCGAACAGC11.1235955056179776No Hit
GGGCTCAAGTGATCCCCCCGCCTCCGCCCATCATCACACCCAGCTCCCGT11.1235955056179776No Hit
GGAACAGGTGGCTCGGCGGTTCGTTCACCAGCGAGCGGGTAGCGTTCACC11.1235955056179776No Hit
GTCCTGGCAGCCCGGCACCAGCCTCACCTTCGCGCGGAACCCCGACTACT11.1235955056179776No Hit
GGACCCGGAGACGTCGCGCTCGCGGAGGACGCCGCGGATCCTGCAGAGCC11.1235955056179776No Hit
ATACGATGGTAAGCGTCGTCGACGCCCACGCCATGTACGACGGCTTCGAC11.1235955056179776No Hit
GCCGTGGTTCTGGAGGATGACGAGGATGACCTTGAGGTCCTCGGCCACGA11.1235955056179776No Hit
AACCTGGGAGGAGCGCAGAGCCCTTGACGCGCGGGTGCGCCTGGCACGGA11.1235955056179776No Hit
GCACATGTTCTCGAGCATATTGTAAAGTAGTTTAAAGGTCAGCCGAGTGC11.1235955056179776No Hit
TACATATACATACATATATGTACATATATATTTCTGTTAATCAAAAAGCG11.1235955056179776No Hit
GTCTAAGGGGGCGATAAGAAATGGCTCGTTACATCGGTCCTACCTGCAAG11.1235955056179776No Hit
CAGCCACATGATCGCGGCGACGATCCCGAACTGCGTCAGCTACGACCCGA11.1235955056179776No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)