FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003669985

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003669985
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17
Sequences flagged as poor quality0
Sequence length100
%GC66

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTCCAGATAGTCCCCAGTGGAGACCCCGTGCTCCTCGGCCAGCCACTGC211.76470588235294No Hit
ATACGACGAGACCGTTCGGTGGCACTCGATTGTAGAGTTTTAGGCGCTGT15.88235294117647No Hit
TAAGAGCACAGCGCTGAATTGAGACGCGGATATTCCTGCCTGCTTCCGGA15.88235294117647No Hit
TCAGCCCAGTGCGGGAGCGACGGACGAGTCGGCGCAGACCGTCCCGCGCT15.88235294117647No Hit
GCCAGCGACAGCGGTTTGGCGATCTCCGGCAGGCCGAGCAGCCCGCAATA15.88235294117647No Hit
GTTCCAGGTCACGACCGACACCCTGTCGGAACATTACCGGGAGCTGGTGG15.88235294117647No Hit
GGCACGAGTTCGAGCAGGATGTCCTTGACCGCCTGGGCAGGCTCCGAGAG15.88235294117647No Hit
CGCGCGTCCCCATCAAGTCCTCGCCGACGCGCACGTCCCCGAGCCGCTTG15.88235294117647No Hit
CACCTTGAATTTCCTGGGGTTCGGAACGGTAAACAGGCTGCAGAGGTATA15.88235294117647No Hit
GTTCCCAAGGGAGACGTGCTGGCCGTGGCCCGCATCGCAGGCATCCAGGC15.88235294117647No Hit
GCTGCTGGATGTCGACGCGTCGCAGCTTGGCGCGGCCAATTTCGACCTCG15.88235294117647No Hit
CGGGCACGCCGACCAGGCGGGCGATCACCCGGGCGGTCAGCGGCATCGCG15.88235294117647No Hit
ATGAGGGGCTGCACAACGAACTGGTGCAGGGGATCGACGGGAAAACCGCC15.88235294117647No Hit
CTCGTAGTTCGCGCGGCCCTGCTCCGTGGTGATCCACTCCGGGGTCTCGC15.88235294117647No Hit
CTCGCGGATTGCGGCGGTCAGCGCGGGCTGATCGACCAGCTTGCCGCGCG15.88235294117647No Hit
ACGCGCAGCAGGCCGAGGCCGGCGCCGAGGGTGCTCCGGGGGCCGAGGCA15.88235294117647No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)