FastQCFastQC Report
Tue 10 May 2022
EGAF00003670238

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003670238
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences660413
Sequences flagged as poor quality0
Sequence length100
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACACACACACACACACACACACACACACACACACACACACACACACACA8760.13264426957070802No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA7350.11129399330418994No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA6800.10296587135625737No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)