FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003670251

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003670251
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length100
%GC63

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGCCAGCCTCCTTGAGGGCCTTGGCGACCTCGAGACCTTGAGCCGCGTA211.11111111111111No Hit
GCTCGAGAAGACGGAGTCCCAGGTCGCCGACCCCAAGTCCGAACGCAAGC211.11111111111111No Hit
CGTTTTCGGTGCTGCTGGATGGGATGGCCGAGGCCGGGCTGGATGACGAG15.555555555555555No Hit
GTTTCGAAGTCGTCCATTTGGGAGACGGAGGCGAGTTTGCCCAGGTACCG15.555555555555555No Hit
GCCACCACCCGACTGCGAAGCACTCGTCGTCGCACCTCCACCGCCACTAC15.555555555555555No Hit
ACTTGCAACTCCGTCTCGGTAGGGCACAATTTATCCAAGTCATCCAGAAT15.555555555555555No Hit
CACGCCGCCAATTTGACGGCGGTTCAGCGATCGGTTCCGTCGAAGATGGT15.555555555555555No Hit
GCTCAAGGGTGGGGATCACCACCGTGAGTAGCTGCGCAATAATCGACGAG15.555555555555555No Hit
GATCTACCAGCAGTTCGGCAACCAGGTCCCGACGGTGTTCGTGCTGGCCG15.555555555555555No Hit
AGGGCGGCGAGCGCGTTCACCTCGCCCGCGCTCAGCCGCAGGTCGCCCAG15.555555555555555No Hit
GCAAGGAACAGCGCCACTTGCGCCGGCTCGGAGGGGTCCATGATCCGGCC15.555555555555555No Hit
CCACATCGGAACCGCACCGGGCTCCCCGAAGGCAACTTCCCCTCCCCGCG15.555555555555555No Hit
CAGCTGGTCGCGCTCCTCGTCGGTAGCAGCACCCCTGAGCTTGTCTCTTA15.555555555555555No Hit
GTTCCGCCGGGGTCTGCGCATGGTTCTTGAAGACGAGCAAGACATCTTGA15.555555555555555No Hit
CGTTCGGGCTTCGACCCGTTTGACGCCGACCGCGGCGTGGTTTCGGTGGC15.555555555555555No Hit
GGCTGAGGACGCCGCTGAATCCAAGGCCGACATGGAGCGGCTGTTGGCCA15.555555555555555No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)