FastQCFastQC Report
Fri 10 May 2024
EGAF00003670253

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003670253
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Total Bases2.1 kbp
Sequences flagged as poor quality0
Sequence length100
%GC64

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACCCAGGCGCGACCGCAGCACCGACCAGGCATCGTCGCGGTTCCGGTGC29.523809523809524No Hit
ACGGCGCCTTTCTCGACCTCACGGGCTATTCGCGGGAAGAGATCTACGGC29.523809523809524No Hit
GGCCACTGCGGCAGCCAGATCGACGTGCGTTGCGGCAACGAAGCGGACGT29.523809523809524No Hit
GCCTGCTGATGGCCTACAGCTTCGGCAAGGCGCAACGCCTCCTGGCGGGC14.761904761904762No Hit
TACCAGCGCCGATCAGAATGCCAGCCTTGATTGAGGCCGGAACATAGCGG14.761904761904762No Hit
GTACTTTCGCAGTCAACTGGTTTTGCTTCCGAGGCAGTGGCCGCGATGGA14.761904761904762No Hit
GCACAGGTGGCGGCGGTGGCGGCCTCCCACCCCAAGCGGGCGAGCAAGCC14.761904761904762No Hit
TCCCCAGGATGTGGCGCGCGCCGCCGTGGAGGGCCTGCTCTGCGGGCTGG14.761904761904762No Hit
TTCTCACCGTGATCTAGGAAGTACGCCTGGGGGCATGACGACCTAACTCC14.761904761904762No Hit
GCACCCGACCGCCGCCGTGTGCGGCACCCCCCGCGAGGCCTCTTACGAGC14.761904761904762No Hit
CTCAAGCGGTCGTACTGGCATAGTATTCATCAACGTCAACGACTCCGTCG14.761904761904762No Hit
GGCCGACAGGGCGCTGATCGAGGATGTGCTCGCCGCCCCCTGGATCACCC14.761904761904762No Hit
CGGGTGTGCCGGCTTCCGCTCCCAGCGGGATCACGTGCCCGGCCTGCGGG14.761904761904762No Hit
CTCTTGTCTGTTTCTGCCTCCGTGGGCACTGCTGCTTGGCTGGTGGTCTC14.761904761904762No Hit
CCTTAACCTGCTTAATAGCCAGGCCGGCTTTTGCTGGTCGCCGGCTTCTT14.761904761904762No Hit
CTTCAGGATCTGCTCCTCCTTCTCTTTCCTGCCATCCGGCAGCACGGACA14.761904761904762No Hit
CGCTTGATTATCAGATTTAGAACCTGCGCACCCGCGACAAAAGCCTGCCA14.761904761904762No Hit
GGGGGAAGAGAGGTGCGCCCGAAACTACAGCCAACCTCATCTCCGGCCCC14.761904761904762No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)