FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003670254

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003670254
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length100
%GC63

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACAGCGACCGCACCGGGCTCATCGCCAGCGCAGCGGGCGGCACCCTCTT29.523809523809524No Hit
GCCGGCATGCACCGCGTGCAGCGGGTCCCCGCCACCGAGAGCAAAGGCCG29.523809523809524No Hit
TTCCAGAACGGCGTCCCGTCCTTCCGGTAGTTCAGGATCTCCACCGCCAC29.523809523809524No Hit
GGTGTAAAGCTACAGGAGAGAGTGTGCCGGGCTGACAGATAAAAAGGTAT14.761904761904762No Hit
AGCAACGGCTGCATCGACGCTGCGCGCCGCGCCCAGACATGGACTTCGAA14.761904761904762No Hit
GGCGAAGCAAATGCGCCGCGAGCGACGTGAGACTGAGCGAAGAAAGCTGT14.761904761904762No Hit
GAGTTTCACAAGATTACCCAGACCTTCCGGCCAAGGAAAAAAACTCGCTG14.761904761904762No Hit
GCCGACATCTTCGTGCACAGCTCCGCCATCGTGACCGGCGGCGTGGTGAC14.761904761904762No Hit
TCTCCGCGAAGGAGAAGACGTTTGGAGTTGGTTTCAAGCTGCGGAGACCA14.761904761904762No Hit
CATCGAGCCCCATGATGTACTGGAGATACCTAAGTTAGCTGCGCTATCAT14.761904761904762No Hit
CTGTGTCTGGTATCAACGGTCAGCCTTCGTGTAGTTATCTTCGTGGATCT14.761904761904762No Hit
TCAGAAACCTGGGCGGAGATGCGCACGGCCTCGGGCTGAAGATCTGCCCT14.761904761904762No Hit
GTTCTGGGGGGTCTCGTGCGTTGTTGACCTCCTGTGCGCATCAATCAAGC14.761904761904762No Hit
GACCGTTGGGCAGGGCGTCGCCGAAGGCTTCCATCTTGGCGCCAACCTCG14.761904761904762No Hit
GCCCTGCACGCTCGGCGGCGCGATCACCAGCGCGCGTCGCAGCGCGGCCT14.761904761904762No Hit
TTCAGGGGCGGAGGCTGAACCGGAGAGCACCCAGGCGGCTTGGCGCGCGG14.761904761904762No Hit
CTTGTCCACCATCGCTTCGCGGCGGGTGCGCGCCTCGTCGAAGTGCTCGG14.761904761904762No Hit
CTCTTTGCCCTGCAGTTCATGGTCTTTGTGATCATGCTCATTCTCGGGGT14.761904761904762No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)