FastQCFastQC Report
Tue 10 May 2022
EGAF00003670307

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003670307
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences780988
Sequences flagged as poor quality0
Sequence length100
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTATAAGCATATCAATATTAAAAAGCAAGCAAGCAGAATTTGGAATTC13990.17913207373224685No Hit
GTACATGGGATTCCTGAAGCTGACAGCATTCGGGCCGAGATGTCTCGCTC9510.12176883639697408No Hit
ATTCTAAGCAGAGTATGTAAATTGGAAGTTAACTTATGCACGCTTAACTA9070.11613494701583124No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)