FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003670337

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003670337
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26
Sequences flagged as poor quality0
Sequence length100
%GC61

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTTCTGCGTTTACGGGCACATCATGTTGATACTGTTCGCCATAGCGTTG311.538461538461538No Hit
GTTTCGAGGCCGTCGCGGGCGCGGAGATCCTGCGGTTCTGGATCGACGTC27.6923076923076925No Hit
ATCCACCATCGACCTCCGCCTAGCTTTAAAACAGCTCTCGACCGACACCG13.8461538461538463No Hit
TCTCTAACCTATCAAAAGAAAACGTTATCGGGGCTACTCTTCGGACTCGC13.8461538461538463No Hit
ATCGTAGCGCCAGGAGGGGTTCGACTTGCTAATCTCCGCGCGTGAGCGGG13.8461538461538463No Hit
GTCGACCTGTCGTCGCCGGACCCGTACTACGTGCTGCCGCTGGTGATGAC13.8461538461538463No Hit
CACCCCGGTGCGCAGCTGTCCTTCACTGACGCCGACGGACACCGAGTCAC13.8461538461538463No Hit
GCCAGTTCCAGACTTCGAGCGACGGCCGACGCGTGTTCTTCGTGGAGCGC13.8461538461538463No Hit
CAGCGGGTGCTGGGCCCGACCGGGACGGTGCGGCAGATCGTGCCGCCCCC13.8461538461538463No Hit
GATGTAGGCCGCCACGACGCTGAGGAAGCCGATGACGGTGGAGAACAGGA13.8461538461538463No Hit
ACTCTGGAGGCTGAGGCAGAAGAATCACTTAAACCCGGGAGGCGGAGGTT13.8461538461538463No Hit
GCCCATGCGCGCGTCCCCGGAGGCGGGAAAGCAGCTGTCCACCTCGTCGA13.8461538461538463No Hit
GTTACAGCGTAGACCATGTCGTTTTGACCAATGCGATACTGAAGGGGCCT13.8461538461538463No Hit
CGATGGCTCCTGCGATGAGGATCGCCTTCATCGCCCTGGGTCCTCCTGGG13.8461538461538463No Hit
TCCCAGCACTCTGTTCATCTGGCAGGTGGCGGTGGACTCCCGATTCCGCG13.8461538461538463No Hit
CAGGAGAATCCTGTTGGGTGACACCCGATGGCGAGCAGCCTGGCGGGCGA13.8461538461538463No Hit
CTATCTCGGCCGACGTTTCGGGAGCGAATATCGCGCTTACTGCGCCCGAG13.8461538461538463No Hit
GTTACCGTCGTGCAACCGACTCGCCGACTTGAGCGTGGTTGTAATCGAAA13.8461538461538463No Hit
TTCGTCGAGCGCGCCGATCTTGGTCATCGCCTCTTGCGATGCCTCAGCCA13.8461538461538463No Hit
CTTCGCCCCGATGAAGCAGACAAGCGTGGCCCCGACGATCCCATCATCGA13.8461538461538463No Hit
CAAGAAGAGAAGACGATGGGCGCAATTGAAGGCAAAGAGGCAGCAGAAAA13.8461538461538463No Hit
ATCGTCTGCTGTACCTGAATGACCAGGGCCAGAAATTGTTCAGCAGCATT13.8461538461538463No Hit
TGTTGTAGGCGTCGCTCTCGACCGAGTCGGCGGCGGTGGAGAGGGCGACG13.8461538461538463No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)