FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003670338

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003670338
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26
Sequences flagged as poor quality0
Sequence length100
%GC61

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATTAAGCTGCCCTCACAGCGTGCGGCGGAAGAAAAAGCCCGTGAAGCC311.538461538461538No Hit
ATCACCGACTGGGTGGCCTTGGCGATGGCACGCTCGGGGTCGCTGGACTC27.6923076923076925No Hit
TGCGCCAGACGCTGCTTGAGCGCGGGCGGCGTGCTGGCCGGGTCCTTGCG13.8461538461538463No Hit
GTCCACAACGTGAGGATGAGAAGAAGCGCGCCAAGAAGGTTGGTCCAGCG13.8461538461538463No Hit
TTCTGCATTTCTACCGATAATTGAGGATAGCAGGTTCGACTGAGAGGAGA13.8461538461538463No Hit
CGCCAGCAACATGGCGCTGGCGGTCGGCGCGGACGGCGCCTTCGTGGCGC13.8461538461538463No Hit
CGTAGCGCTGCCCCCGCTCCAACACCAGAAAGCGGTCCTCGCCCTCGAAC13.8461538461538463No Hit
CCGGGATGCGGTGAGGAAAGATAGAACGCGCGGCGTGTTCGAGCGCGCCG13.8461538461538463No Hit
GGGACACAGAGCCCTTTAGGGAGTCCAGTCTCACGGCACACACGACCCAC13.8461538461538463No Hit
GGCTGGGGGACCGGCTCGCGGGCTCCGGCGACGATCCCGAGGCGCCGCGC13.8461538461538463No Hit
ATCCTGGCGGCGGTGTGCAGGATCATGTACCGGAACGCAGCAATCTCAGC13.8461538461538463No Hit
GAATGGATGGACCGACTCGACGCCGAGCAGAGGAAAGAAGAGCGCGCGCA13.8461538461538463No Hit
GGGGGAGTGGTTTCGGCGGGCAACGCATCAGCAGCGAAACGCTTGAAGAA13.8461538461538463No Hit
GCTCGACGGTGTAGAGGTCCTCGGCGGCGTGGTGTTCACCGGACTCCTCC13.8461538461538463No Hit
AGATACACCCCGCCGCGCAGCCAGCCGCCCGCGAGGATCTGATCCAGGTA13.8461538461538463No Hit
CGAGCAGCGCGTGCTCGTGCCGCCCCATCGAATTGAAGCGATCGCCATAG13.8461538461538463No Hit
CTGCAGTCGCCGGAGTTCGTCTCGGGCGTTCGTCAGGCTGGAGCCGACCA13.8461538461538463No Hit
GGGTCAGCCAATGGCCAGCGAGAAAGATGTCTTCTGACCCGCTCACGCGC13.8461538461538463No Hit
CCTCGGATTGTTCTTTTTCTGCTGCCTCTTTGCCTTCAATTGCGCCCATC13.8461538461538463No Hit
GTCGGTGATCCTGCGCGTCGCGACGTTCTTCGTCGGGTCGATGATCCTGC13.8461538461538463No Hit
ATGCTGAGTTGCGCGCGCGTCCAATCCGCGGTGTCGGTCGAGAGCTGTTT13.8461538461538463No Hit
GCACCAGACCGGCGGGGAAGAAGAAGAACATCACGCTGAAGATGAGCGGC13.8461538461538463No Hit
ATTATGTGGGAGGGACGGACTTCCTCAAGGAGAAGGTCGTCGTTGTCGCC13.8461538461538463No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)