FastQCFastQC Report
Tue 10 May 2022
EGAF00003670354

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003670354
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences893593
Sequences flagged as poor quality0
Sequence length100
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGC13480.1508516740842867No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA11610.12992492107704515No Hit
GTACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATAT11500.12869393560603093No Hit
GTATAAAATCAGGCAGTTTTTGATCACGTTTATTGTAAGCCGTCAGCATC11270.12612005689391032No Hit
GACCATAATGTGATCCCTTCCGGCGGTCGGTATAAAATCAGGCAGTTTTT10570.11828651298745627No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)