FastQCFastQC Report
Tue 10 May 2022
EGAF00003670355

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003670355
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences914723
Sequences flagged as poor quality0
Sequence length100
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGC15770.17240191839496766No Hit
GTATAAAATCAGGCAGTTTTTGATCACGTTTATTGTAAGCCGTCAGCATC13680.14955347137876712No Hit
GTACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATAT12850.1404796862000846No Hit
GACCATAATGTGATCCCTTCCGGCGGTCGGTATAAAATCAGGCAGTTTTT11720.12812621963151685No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA11230.1227694066947043No Hit
GTATACGGGCGTCGGCATCCAGACCGTCGGCTGATCGTGGTTTTACTAGG9930.10855745400520156No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)