FastQCFastQC Report
Tue 10 May 2022
EGAF00003670503

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003670503
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences204721
Sequences flagged as poor quality0
Sequence length100
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAATAACACGGCACATAAAAAAGATTAAATTAAGAGAAGGGACAGGAACT5050.24667718504696634No Hit
TTCTTACACCGCGAGGAAGCTTCCTCGCAACTTTGTGGTAGATTACTATG3710.18122224881668222No Hit
ACCTAATACAATAACACGGCACATAAAAAAGATTAAATTAAGAGAAGGGA2700.13188681180728895No Hit
GTACATGGGACAGGACACAGCTGGGTTCTGAAGCTTCTGAGTTCTGCAGC2570.12553670605360465No Hit
GGACAGGACACAGCTGGGTTCTGAAGCTTCTGAGTTCTGCAGCCTCACCT2510.12260588801344269No Hit
GGACACAGCTGGGTTCTGAAGCTTCTGAGTTCTGCAGCCTCACCTCTGAG2410.1177211912798394No Hit
TCCCTGAAGACTTCCTGTCTCTGAGCAGCTCAGTTCAGTTCCAGGTCATA2150.10502097977247082No Hit
GTATGGAGGAGATGTGTCTCATGGAGAAGCATCCGGGCTCAGGTGACCTT2120.10355557075238984No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)