FastQCFastQC Report
Tue 10 May 2022
EGAF00003670505

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003670505
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences207296
Sequences flagged as poor quality0
Sequence length100
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAATAACACGGCACATAAAAAAGATTAAATTAAGAGAAGGGACAGGAACT5150.24843701759802408No Hit
TTCTTACACCGCGAGGAAGCTTCCTCGCAACTTTGTGGTAGATTACTATG4200.20260882988576723No Hit
GTACATGGGACAGGACACAGCTGGGTTCTGAAGCTTCTGAGTTCTGCAGC2760.13314294535350416No Hit
GGACAGGACACAGCTGGGTTCTGAAGCTTCTGAGTTCTGCAGCCTCACCT2580.12445970978697128No Hit
ACCTAATACAATAACACGGCACATAAAAAAGATTAAATTAAGAGAAGGGA2520.12156529793146034No Hit
GGACACAGCTGGGTTCTGAAGCTTCTGAGTTCTGCAGCCTCACCTCTGAG2440.11770608212411239No Hit
GTACATGGGAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTA2390.11529407224451993No Hit
GTATGGAGGAGATGTGTCTCATGGAGAAGCATCCGGGCTCAGGTGACCTT2150.10371642482247607No Hit
TGCTAGTAGCTGCCTTCTGCTCTCCAGCGCTCTCAGCACCAATGGGCTCA2120.1022692188947206No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)