FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003670507

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003670507
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31
Sequences flagged as poor quality0
Sequence length100
%GC63

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCGTACCCCACTCTTCTCGCCTGGAGCCGAACGAGAAGCCTTGCCGGACA26.451612903225806No Hit
CGCTCGGTCCTGCGCCGGACAGTTCGTCGAGCCCTTCCTCGCCGGAAACG26.451612903225806No Hit
GTCGGCGACCCCGATCCCCATCTCCGTGATCGCGAAGCGCACGGCGCGGT26.451612903225806No Hit
GCCGACCTGGGGTCCCTATTCGACGGCGACGGGCGCATTCACATCGGCTA26.451612903225806No Hit
GTTCGGCGGGGCCGGCGCCCGACGGCTCCACGCCCATCGACGCCAGCTTC13.225806451612903No Hit
GGCGACGTACCTGGCATCGCTTGAGGCCGCGTGCGCCGCGGCGCCGACGC13.225806451612903No Hit
CCGCGCGGCCACTTGCGCCGCACGCAGGGTTCGCTCGGGGGGATCTTGGC13.225806451612903No Hit
TGTGGGCGCTGCTGGACGCGGCCCGGCGGCCGCGGTGGGTGTGGGCGCTG13.225806451612903No Hit
GCTCGGCGTCGCCGAGATCCTGCAGCGCATCGGCGACCCCACCGACCCCG13.225806451612903No Hit
CGGAAGAAAAGTGCATTACATATATTGGGAATGGTTGCATTACACGAACA13.225806451612903No Hit
GCCGAAGCCAACGCGGCTTGTGTCTCATCGGCGGTGCGGCCGGGAAACAT13.225806451612903No Hit
GTCCTCGACGGCGGCTGGGCGGCGTGGCTGGCGGCGGGTGGTGCGGTGGC13.225806451612903No Hit
TCGATGGACAGCGCGATCAGGATGCGTTTGCGCAGCGGATCCTGATGGAA13.225806451612903No Hit
GACGACGGACGCCCGACGGTTCCCAGCGACCCTCTTCCGGGAACCGTCGA13.225806451612903No Hit
CAAGACGAAGAATGCTGAGCTGTCAAAGTTTAGGCGGGAGAAGAACGCCA13.225806451612903No Hit
GTACAGACACCGAGCGCCAGTCACACTTGCTATTGACCAGCCAGGCGCTA13.225806451612903No Hit
CGGTAGAAAAGTGCATTACATATTTTGGGAATGGTTGCATTCCCCGAAGC13.225806451612903No Hit
CTCGTCGGTCCGGCACGAGCGGTGCGTACCCGTGCAGTCCATGCGCTCTC13.225806451612903No Hit
CCCCGCGACATCTTTGATATATCCTCGCTCTTCAAGAATATCCCACATGT13.225806451612903No Hit
CAACGAGGGAAGCATCAAGTTCCTCGGACCGGCTTTCTTCACCAAGAGGC13.225806451612903No Hit
ACCTCGTCGAGCACGAGCCCACCCTGCGCGCCGAGCCGGCCCAGCAGCGT13.225806451612903No Hit
CAGGTCGCCTCCTCGCAAAGGACCTTTGTTCAAGTGTCCTGCAATCTGGC13.225806451612903No Hit
GGTACCCGACGGGATCGACGATGAAAAGCTTCTGTTCCTGTCCGATATCC13.225806451612903No Hit
ACCGTGAACAGCCCCAAAACTGTTTGCCCGCTTGCTTTCCACGGCTGGCA13.225806451612903No Hit
GCCCAGGCACGCCCTCGATGGCGAAATACTCCACGCTCAACGTCACCCCC13.225806451612903No Hit
GGCCCACTGGGCCACCTGCGCCAGCGGCAGGCGGGTCTGCGCGGTGATCG13.225806451612903No Hit
GCTGACCTGTCGGCGTCGGAGGTCTCTGAGCGCACCGGTGTGGCAAGAGT13.225806451612903No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)