FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003670508

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003670508
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31
Sequences flagged as poor quality0
Sequence length100
%GC62

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCAACGTTTAGGCTGGTAAGCCAACCTAAGTGGTTGAGTCCGCTGTAGCC26.451612903225806No Hit
TCCCTCGCCTGCTCACCGATCCCCGCGTCAGCGTCGAGCTGATCGCCGAC26.451612903225806No Hit
GTCCCACGAGCCTCGCGTCGATGAAGCTTCTGACGTCCTGGATCGAGGAA26.451612903225806No Hit
CGCCGGGGATGTGGCCGGCAACCGGGTCGAGCGGCTCGACCTCGCCGCGG13.225806451612903No Hit
GGCCGCACACCTGCTGGCCGCCGCGTACGGCGACGCGCCCGAGGGCGAGG13.225806451612903No Hit
TCCGGGAGGACGTGCTGATTCTGGCCGGTCAGTATCGCGCGAGCTTCGGG13.225806451612903No Hit
CTATTGTACACACAACGCACCCCGGGTCTGCAGCACATAGGGCCGCAGCG13.225806451612903No Hit
AAGCTACCTGCACAAGGTTGCAGAGGGCGAGGAACGCTGGGCGGCGAAAG13.225806451612903No Hit
GATTGGCGGGGGCCAAGGAAGCCAAGACCTACTGTTTGGCGCCCAACCAC13.225806451612903No Hit
GTCCGTCTACTGGGACATAGATTGGACTCTCAAACAACAACTGCTTAGTT13.225806451612903No Hit
GGTCTCGTCGGGCGTAGGTCACGAAAGCTTCAACGGTGCGTCTCGGATAC13.225806451612903No Hit
ACACGTGCGGGCGATCGTTCTCCATCATCAGCATCTGCTTGGCGCGATCA13.225806451612903No Hit
CTTTAGCAAGTCCGCCAAGCTGCGCGGCGGCGAGATGGGGCAGGCGATGA13.225806451612903No Hit
CCCGCTGTGGAAACAATTGAGAGGAAGAGACAAGAAAATGATGCAGTGAT13.225806451612903No Hit
GGTGCAGGATATGCGCGCGGACGGCTGTGTGTTGGGCGAGGTGCGGTTTG13.225806451612903No Hit
GAGTTAGCGCCGTACGACGCGTCAGCCATGCTCATCCCTTTCCACAAAAT13.225806451612903No Hit
GTGCTGGTCGTGGCCTTCCAGGTAGAGGTCCGCTTCCGGCCCGCTGTCGT13.225806451612903No Hit
CCCCCCGTCGTTCCCAGGTCGCCCCGCTCGATGGCCCGCAGGTCGGGCCG13.225806451612903No Hit
GTTCCAGATATCGCCGCGCTGTGACTCTTGCCACACCGGTGCGCTCAGAG13.225806451612903No Hit
AAGCTGGCGTCGATGGGCGTGGAGCCGTCGGGCGCCGGCCCCGCCGAACC13.225806451612903No Hit
ATCGGGGCGGCCTTCGCATCATCGGGGCCGTCAAGGGCCGAACAGAAGTA13.225806451612903No Hit
GTCCGTCTACTGGGTCATAGATTGGACTCTCAAACAACAACTGCTTAGTT13.225806451612903No Hit
GATTGGCGGGGGGCAAGGAAGGCGAGCCCTACGGTTTGGCCCCCAAAAAC13.225806451612903No Hit
CCTGTCGACCCACAGCACGCCATCGTCCCATCGGACACGAGAATCGAGAT13.225806451612903No Hit
TGCCGGTGCTGCGGGCGCTGCGCGCCGCGGGGGTGAGCGTCGTCATGCAC13.225806451612903No Hit
CCTCCCACGAATCGAATTGACAACGACCACCTTACGCACACAGAAGCAGT13.225806451612903No Hit
GATCGTCCGTCTGTCGTTCGAGGTCCTCCTGAGCCTTTTGCATCTGGATT13.225806451612903No Hit
GTTCCGTGCCGCGCACAAGGCCATGAACACGCTCGAGCATGGCTTCACGG13.225806451612903No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)