FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003670607

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003670607
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length100
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCACGATCTGGTCAACGATGCTCTCGCTTCGGAGTGGATGAGTGAAA212.5No Hit
ATTAGCCTCCACGTAAGGTACACGCCAGATGCTCCAGCTCTATCGCGGCT212.5No Hit
ACACCTGTGAGCGTCGCCGCGGTCCGGCTGGTTTGGCGAATGGCGCTTAC212.5No Hit
GTAAAAAAAACACATAACATAGCCAACCACAAAATAAAAATAACATAAAC16.25No Hit
AAACAGACGGGCTCACCGCGCAGGGCATGGCGCAAGCACTCGCCGCGTGC16.25No Hit
GTAAATGAAGTGGGGACATGGAGAGGAAGAATGTGCGCTTACCCTGGGAG16.25No Hit
GGTCGAGCGGGCTGACGTCGAACAGCTTCTGACCGGTCGTGCGCGCGCCC16.25No Hit
AGTCAAAACAACCCAGATTGTTTTAGTTCCAGATTATTTTCTGAGCCCTT16.25No Hit
TGCCTGCGAGGTTTCGTCGTCCTTCTTGTCCTTGCCGAGGGCGCGGGTGA16.25No Hit
TTTAGATTCCTCTGATAAATGGAAGCGAGAATCTTCCTCATTACCTAAAA16.25No Hit
GAACAAGCCTTCAGCACCGTCAATTTGTTCCCCAATCCAAAGGGCCATTC16.25No Hit
TGGCCGTGCTGGCCGGATGGCTGGCCTCCGTGATTCCAGGCCGCCGGGGA16.25No Hit
GTAAAAAAAACACATAACATAGCAAACCACAAAATAAAAATAACATAAAC16.25No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)