FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003671196

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003671196
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2784
Sequences flagged as poor quality0
Sequence length100
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT60.21551724137931033No Hit
GGATACTTCAGTCCATGTTCCTGGCTAGCAGCTGTAATTCGATTAATCCA60.21551724137931033No Hit
TATCTAGAGTCACCAAAGCCGCCGGCGCCCGCCCCCCGGCCGGGGCCGGA60.21551724137931033No Hit
ATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAGGCACGGCGA60.21551724137931033No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT60.21551724137931033No Hit
GCTCCGCGTCGCGTCGCGTAGATTCGCGTCGCCGTCGACCTCAGAGGCGG50.17959770114942528No Hit
CTATCAAGCAGTCCTTCTGCCCCAGCCTCCCCAAATGCTGGGATTACAGG50.17959770114942528No Hit
TGCGTGCATTTATCAGATCAAAACCAACCCGGTCAGCCCCTCTCCGGCCC40.14367816091954022No Hit
CTCCTGCACCTGCGCCGGCTCCTGCAAATGCAAAGAGTGCAAATGCACCT40.14367816091954022No Hit
TCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCC40.14367816091954022No Hit
TATCAACGCAGAGTACATGGGAGTGCCCGAGATGCCCGGCGAGACACCGC40.14367816091954022No Hit
CTGTGATGATGAAGCATGGTTACATTGGCGAATTTGAAATCATTGATGAC40.14367816091954022No Hit
AACATGCACAGCGGTCAAACAGTATGTCCCAAGGGGACTTAAGCGCGGTG40.14367816091954022No Hit
GTATAAATACTGGCTCTAAGCTTTCATCACTTCATTGACAAACTGAATGC40.14367816091954022No Hit
ACCATGAAAAGGGCCTTTGCTGGGGGAGCCAGCTCCCTGAGGGCGGCGTC40.14367816091954022No Hit
TAGTGAGACCCTGTCTCTACAAAAAATTAGAAAATTAGCCGGGCATGGTG30.10775862068965517No Hit
GTGCTGGGATTACAGGCGTGAGCCAGCTCACCCAGCACTCTGGGAGGCCA30.10775862068965517No Hit
GGCTCCAGCTCACTCTACCCCATCTCCTTGCCGGGTCAGCCCTGACAAAG30.10775862068965517No Hit
GGCCATGCACTCTGCGATGTGCTGCTCCCTCTCCCGACGCTTCTGCTCTT30.10775862068965517No Hit
GCCTGGAGCCCCAGATCACCCCTTCCTACTACACCACTTCTGACGCTGTC30.10775862068965517No Hit
GCTTTAACCATGATGACAATCACTGGTAAGACTAAGCAAAGGAAGTGACT30.10775862068965517No Hit
GATCCCAACTGCTCCTGCGCCGCCGGTGACTCCTGCACCTGCGCCGGCTC30.10775862068965517No Hit
GAACCCTGATCTACGGGCACTGGAGCATAATGAAGTGGAACCGTGAGCGC30.10775862068965517No Hit
GTCTCATTCTGTCACCCAGGCTGGAGTGTGACCTCAGCTCACTGCAACCT30.10775862068965517No Hit
GGCCTGGATGTGGCTCTTCGCACTGAAGGCCAAGTAGTAGATCACAAGGC30.10775862068965517No Hit
TGCAAACAGTACCTAACAAACCCACAGGTCCTAAACTACCAAACCTGCAT30.10775862068965517No Hit
GTCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCCAATCTCGGCTCA30.10775862068965517No Hit
CCACCATGCCTGGCTAATTGTTGTATTTTTAGTAGCGATAGGGTTTCACC30.10775862068965517No Hit
GTACATGGGAGGAACCTTTGACTGCTTCCATGTTGGCATCTGCCCCTCCT30.10775862068965517No Hit
AAAGTGCATCTCAGAATCAACGAAGGTTCTAGGCCGGGTGTGGTGGCTCA30.10775862068965517No Hit
AAGTAGGGCCATATGCCTCGGGAATAAGCTGACGGTGACAAGGTTTCCCC30.10775862068965517No Hit
GTGTTATACCCTCCATGTGTCATTTACAGAAAGAGGTGGGATTGGAGCAC30.10775862068965517No Hit
GAGCTAAGTAGGGGAAAGAGGCAGGGGGAGCTCCCAGCAGGACCAAAGGG30.10775862068965517No Hit
GAATAGAGGAATATGAGCTTCCAGATTTGTAAACTGATGGGAATGATCCG30.10775862068965517No Hit
GAGATAATCTGGGCCTCTGCTTGTTAGGGAGAGGAAGAGGACATTCCCAA30.10775862068965517No Hit
GCCCTGCTGGGCCCCATGCTGGCCTGCCTGCTGGCCGACTTCCTGCGATG30.10775862068965517No Hit
GGGTCAAAGTAGGCATCCTTGTCTTATTCCAGTTCTTAGAGGAAAGGCTT30.10775862068965517No Hit
ACGCAGAGTACATGGGAACGAGAGAAGGCAAACTTCAAATTGAGCTGGCT30.10775862068965517No Hit
GGCCTGGAGTCGACGCACGCCGGCCTTGGCGACCTTGGCCGAGGTGCTCA30.10775862068965517No Hit
GACCATAATGTGATCCCTTCCGGCGGTCGGTATAAAACCAGGCAGTTTTT30.10775862068965517No Hit
GATTACAGGCATGCACCACCACTCCCAGCAAATTTTGTATTTTTCATAGA30.10775862068965517No Hit
CACGAAGACAGAGCCTATTGACCAAAAACTTCAGGATCTGCATCTGGGCA30.10775862068965517No Hit
CTGAGCGTCCGAGCGAGACTCTATCTCAGAAAATAAAGACAGAATGAAAG30.10775862068965517No Hit
ATACAGGACTCGGCTCCGGGGGCAGGGCGAGGAATGGAAGTTGGAGTACG30.10775862068965517No Hit
GTTTTGCCCCTGGCCAGGATTGCTACAGTTGTGATTGGAGGAGTTGTGGC30.10775862068965517No Hit
CCCTTAAACAGAGGAGTTTTGTGGATGCTGAGGTAGATGTGACCCGAGAT30.10775862068965517No Hit
TTTGTAGACTGGAACATTTCGAGCAATGAGTGCGCCACACGGACGAGTGC30.10775862068965517No Hit
AACTTTATCTTAGCTAGACCTGAAGTCCATATGAGTTCTTAATCACCGCT30.10775862068965517No Hit
ACATGGAGAAACCCCATCTCTACTAACAAAACAAAACTAGCCGGGCATGG30.10775862068965517No Hit
GTTTTGATCTGATAAATGCACGCATCCCCCCCGCGAAGGGGGTCAGCGCC30.10775862068965517No Hit
CTCCTGGCCTCAGTGATGCCTCCTGATCTATCCATAGGCCTGGAAGATCA30.10775862068965517No Hit
GTCTTTCGGTGTATACATTATTTGAGACGCGAGTTTATATACAAGTTGCA30.10775862068965517No Hit
GTGGAGGCATAGGCCTGGGCCCCGGTCACGTCGCCAACCATCTTCCTGTC30.10775862068965517No Hit
AGTGGCAGGAGAAGGTCAGCTGCGGGCGCAGGCAGGAGCGGATCCAGGAG30.10775862068965517No Hit
GTTCTAGTCTGTGTCCTTCAGTAAGTAGGAAGTTCACTGAAGAGAGTCTT30.10775862068965517No Hit
AAGCTGCAGGATGCTGAAATTGCAAGGCTGATGGAAGACTTGGACCGGAA30.10775862068965517No Hit
CCGCGCGTGACAACAAGAAGACCAGGATAATTCCCCGCCACCTGCAGCTC30.10775862068965517No Hit
GAGTGCAATGGTGCAATCTCAGCTCACTGCAACCTCCACCTCCTAGGTTC30.10775862068965517No Hit
CCGTGACGATGACCAGCAGCCATAGCGCCGACGGATGCGCCGACAGCAGC30.10775862068965517No Hit
CTCCGCAGCGGTCTCCTCTGGAAGAGCTTCGCTCCCAAGAATCTCTCTGT30.10775862068965517No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)