FastQCFastQC Report
Tue 10 May 2022
EGAF00003671649

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003671649
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences739604
Sequences flagged as poor quality0
Sequence length100
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCTACACCGCCCAGATCGGAGCGGACATCGCCCTGCTGGAGCTGGAGG12800.17306558644896458No Hit
GGCCCATACTGGATGCACTTCTGCGGGGGCTCCCTCATCCACCCCCAGTG10310.13939892158506445No Hit
GTGTAGAACTGTGGGTGCACGATGATCCTGCTGACCGGCAGCAGCTGGTC9230.12479651272843306No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG9030.122092362940168No Hit
GTACATGGGAGAAGGAACAGGGAGCGGCCAGGATGCTGAATCTGCTGCTG8850.11965862813072942No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)