FastQCFastQC Report
Tue 10 May 2022
EGAF00003671651

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003671651
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences728321
Sequences flagged as poor quality0
Sequence length100
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCTACACCGCCCAGATCGGAGCGGACATCGCCCTGCTGGAGCTGGAGG12540.17217682862364259No Hit
GGCCCATACTGGATGCACTTCTGCGGGGGCTCCCTCATCCACCCCCAGTG9390.1289266683234453No Hit
GTGTAGAACTGTGGGTGCACGATGATCCTGCTGACCGGCAGCAGCTGGTC9350.12837745993868088No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG8360.11478455241576173No Hit
GTACATGGGAGAAGGAACAGGGAGCGGCCAGGATGCTGAATCTGCTGCTG8270.1135488335500418No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)